SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0044691
Gene Symbol: TOM1L1
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr17:g.54930172G>A COSM4817453 TCGA-IR-A3LK-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-500a-5p ggtgaatAAGGATTt UAAUCCUU m7b Created HHKTA_21267_NM_005486|965|1004|3.41816734308881|0.884632800832305
hsa-miR-6758-3p ggtGAATGAGgattt ACUCAUUC m7b Disrupted HHKTA_21267_NM_005486|965|1004|3.41816734308881|0.884632800832305
hsa-miR-6891-3p ggtgaATGAGGattt CCCUCAUC m6b Disrupted HHKTA_21267_NM_005486|965|1004|3.41816734308881|0.884632800832305
hsa-miR-500a-5p ggtgaatAAGGATTt UAAUCCUU m7b Created HPRO6_32733_G38806.1_53007523
hsa-miR-6758-3p ggtGAATGAGgattt ACUCAUUC m7b Disrupted HPRO6_32733_G38806.1_53007523
hsa-miR-6891-3p ggtgaATGAGGattt CCCUCAUC m6b Disrupted HPRO6_32733_G38806.1_53007523

Mutation Mutation ID Sample Name Cancer Type
chr17:g.54930153T>A COSM1630299 RK182_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-139-5p taACTGTAGAgctaa UCUACAGU m8a Created HHFCT_67935_cluster-9722_15_8
hsa-miR-421 taaCTGTTGAgctaa AUCAACAG m7b Disrupted HHFCT_67935_cluster-9722_15_8
hsa-miR-4709-5p taACTGTTGagctaa ACAACAGU m7b (m7b->m6b) HHFCT_67935_cluster-9722_15_8
hsa-miR-582-5p tAACTGTAgagctaa UUACAGUU m7b Created HHFCT_67935_cluster-9722_15_8
hsa-miR-6502-5p taactgTAGAGCTaa AGCUCUAG m7a Created HHFCT_67935_cluster-9722_15_8
hsa-miR-6854-5p taactgtTGAGCTaa AAGCUCAG m6b Disrupted HHFCT_67935_cluster-9722_15_8
hsa-miR-139-5p taACTGTAGAgctaa UCUACAGU m8a Created HHKTA_21267_NM_005486|965|1004|3.41816734308881|0.884632800832305
hsa-miR-421 taaCTGTTGAgctaa AUCAACAG m7b Disrupted HHKTA_21267_NM_005486|965|1004|3.41816734308881|0.884632800832305
hsa-miR-4709-5p taACTGTTGagctaa ACAACAGU m7b (m7b->m6b) HHKTA_21267_NM_005486|965|1004|3.41816734308881|0.884632800832305
hsa-miR-582-5p tAACTGTAgagctaa UUACAGUU m7b Created HHKTA_21267_NM_005486|965|1004|3.41816734308881|0.884632800832305
hsa-miR-6502-5p taactgTAGAGCTaa AGCUCUAG m7a Created HHKTA_21267_NM_005486|965|1004|3.41816734308881|0.884632800832305
hsa-miR-6854-5p taactgtTGAGCTaa AAGCUCAG m6b Disrupted HHKTA_21267_NM_005486|965|1004|3.41816734308881|0.884632800832305
hsa-miR-139-5p taACTGTAGAgctaa UCUACAGU m8a Created HPRO6_32733_G38806.1_53007523
hsa-miR-421 taaCTGTTGAgctaa AUCAACAG m7b Disrupted HPRO6_32733_G38806.1_53007523
hsa-miR-4709-5p taACTGTTGagctaa ACAACAGU m7b (m7b->m6b) HPRO6_32733_G38806.1_53007523
hsa-miR-582-5p tAACTGTAgagctaa UUACAGUU m7b Created HPRO6_32733_G38806.1_53007523
hsa-miR-6502-5p taactgTAGAGCTaa AGCUCUAG m7a Created HPRO6_32733_G38806.1_53007523
hsa-miR-6854-5p taactgtTGAGCTaa AAGCUCAG m6b Disrupted HPRO6_32733_G38806.1_53007523

Mutation Mutation ID Sample Name Cancer Type
chr17:g.54930092G>A COSM1384552 TCGA-AD-6895-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1200 acaggTCAGGAGatg CUCCUGAG m7a Created HPKTA_25975_G27971.1_53007444
hsa-miR-1976 acaggtCAGGAGatg CCUCCUGC m6b Created HPKTA_25975_G27971.1_53007444
hsa-miR-3653-5p acaggTCAGGAGatg CCUCCUGA m7b Created HPKTA_25975_G27971.1_53007444
hsa-miR-378a-5p acagGTCAGGAGatg CUCCUGAC m8a Created HPKTA_25975_G27971.1_53007444
hsa-miR-4750-3p acaGGTCAGGagatg CCUGACCC m7a Created HPKTA_25975_G27971.1_53007444

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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