SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0044688
Gene Symbol: TOM1L1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.54913826G>A COSM1230062 587220 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4724-5p gaaaggcGTTCAGTt AACUGAAC m7b Disrupted HHFCT_67931_cluster-9722_10_24
hsa-miR-614 gaaAGGCGTTCagtt GAACGCCU m8a Disrupted HHFCT_67931_cluster-9722_10_24
hsa-miR-532-5p gaAAGGCATtcagtt CAUGCCUU m7b (m6b->m7b) HHFCT_67931_cluster-9722_10_24
Mutation Mutation ID Sample Name Cancer Type
chr17:g.54913812T>TN COSM392496 LUAD-S01357 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr17:g.54913787G>T COSM561682 TCGA-05-4427-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6505-3p tgtaagcGAAGTCAa UGACUUCU m7a Disrupted HHFKP_64157_cluster-9722_5_18
hsa-miR-21-5p tgTAAGCTAagtcaa UAGCUUAU m7a (m6a->m7a) HHFCT_67931_cluster-9722_10_24
hsa-miR-374c-3p tgtaaGCTAAGTcaa CACUUAGC m7b Created HHFCT_67931_cluster-9722_10_24
hsa-miR-4790-5p tgtAAGCGAagtcaa AUCGCUUU m6b Disrupted HHFCT_67931_cluster-9722_10_24
hsa-miR-5579-3p tgTAAGCTAAgtcaa UUAGCUUA m8a Created HHFCT_67931_cluster-9722_10_24
hsa-miR-590-5p tgTAAGCTaagtcaa GAGCUUAU m6b Created HHFCT_67931_cluster-9722_10_24
hsa-miR-617 tgtaagcGAAGTCaa AGACUUCC m6b Disrupted HHFCT_67931_cluster-9722_10_24
hsa-miR-6505-3p tgtaagcGAAGTCAa UGACUUCU m7a Disrupted HHFCT_67931_cluster-9722_10_24
hsa-miR-21-5p tgTAAGCTAagtcaa UAGCUUAU m7a (m6a->m7a) HHFKP_64157_cluster-9722_5_18
hsa-miR-374c-3p tgtaaGCTAAGTcaa CACUUAGC m7b Created HHFKP_64157_cluster-9722_5_18
hsa-miR-4790-5p tgtAAGCGAagtcaa AUCGCUUU m6b Disrupted HHFKP_64157_cluster-9722_5_18
hsa-miR-5579-3p tgTAAGCTAAgtcaa UUAGCUUA m8a Created HHFKP_64157_cluster-9722_5_18
hsa-miR-590-5p tgTAAGCTaagtcaa GAGCUUAU m6b Created HHFKP_64157_cluster-9722_5_18
hsa-miR-617 tgtaagcGAAGTCaa AGACUUCC m6b Disrupted HHFKP_64157_cluster-9722_5_18

Mutation Mutation ID Sample Name Cancer Type
chr17:g.54913787G>A COSM1230061 587262 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4790-5p tgtAAGCGAagtcaa AUCGCUUU m6b Disrupted HHFKP_64157_cluster-9722_5_18
hsa-miR-6505-3p tgtaagcGAAGTCAa UGACUUCU m7a Disrupted HHFKP_64157_cluster-9722_5_18
hsa-miR-4790-5p tgtAAGCGAagtcaa AUCGCUUU m6b Disrupted HHFCT_67931_cluster-9722_10_24
hsa-miR-617 tgtaagcGAAGTCaa AGACUUCC m6b Disrupted HHFCT_67931_cluster-9722_10_24
hsa-miR-6505-3p tgtaagcGAAGTCAa UGACUUCU m7a Disrupted HHFCT_67931_cluster-9722_10_24
hsa-miR-6885-3p tgtAAGCAAAGtcaa CUUUGCUU m8a Created HHFCT_67931_cluster-9722_10_24
hsa-miR-617 tgtaagcGAAGTCaa AGACUUCC m6b Disrupted HHFKP_64157_cluster-9722_5_18
hsa-miR-6885-3p tgtAAGCAAAGtcaa CUUUGCUU m8a Created HHFKP_64157_cluster-9722_5_18

Mutation Mutation ID Sample Name Cancer Type
chr17:g.54913786C>T COSM1290730 TCGA-CK-5913-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4790-5p atgtAAGCGAagtca AUCGCUUU m6b Disrupted HHFCT_67931_cluster-9722_10_24
hsa-miR-6837-3p atgtaAGTGAAGtca CCUUCACU m7b Created HHFCT_67931_cluster-9722_10_24
hsa-miR-4790-5p atgtAAGCGAagtca AUCGCUUU m6b Disrupted HHFKP_64157_cluster-9722_5_18
hsa-miR-6837-3p atgtaAGTGAAGtca CCUUCACU m7b Created HHFKP_64157_cluster-9722_5_18

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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