SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0044686
Gene Symbol: TOM1L1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.54912741A>G COSM1268300 ESO-189 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-10a-3p taaagaGAATTTagt CAAAUUCG m6b Disrupted HHFCT_67929_cluster-9722_8_22
hsa-miR-4753-3p tAAAGAGAAtttagt UUCUCUUU m8a (m8a->m7a) HHFCT_67929_cluster-9722_8_22
hsa-miR-5571-5p taaaGAGAATTtagt CAAUUCUC m7b Disrupted HHFCT_67929_cluster-9722_8_22
hsa-miR-6809-3p taAAGAGAAtttagt CUUCUCUU m7b (m7b->m6b) HHFCT_67929_cluster-9722_8_22
hsa-miR-6881-3p taAAGAGGATttagt AUCCUCUU m8a Created HHFCT_67929_cluster-9722_8_22
hsa-miR-10a-3p taaagaGAATTTagt CAAAUUCG m6b Disrupted HHFKP_64156_cluster-9722_4_161
hsa-miR-4753-3p tAAAGAGAAtttagt UUCUCUUU m8a (m8a->m7a) HHFKP_64156_cluster-9722_4_161
hsa-miR-5571-5p taaaGAGAATTtagt CAAUUCUC m7b Disrupted HHFKP_64156_cluster-9722_4_161
hsa-miR-6809-3p taAAGAGAAtttagt CUUCUCUU m7b (m7b->m6b) HHFKP_64156_cluster-9722_4_161
hsa-miR-6881-3p taAAGAGGATttagt AUCCUCUU m8a Created HHFKP_64156_cluster-9722_4_161

Mutation Mutation ID Sample Name Cancer Type
chr17:g.54912732G>T COSM3770613 PD18285a [soft_tissue][blood_vessel][angiosarcoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-302b-5p ggaatttGTTAAAGa ACUUUAAC m7b Disrupted HHFCT_67929_cluster-9722_8_22
hsa-miR-302d-5p ggaatttGTTAAAGa ACUUUAAC m7b Disrupted HHFCT_67929_cluster-9722_8_22
hsa-miR-495-3p ggaaTTTGTTaaaga AAACAAAC m6b Disrupted HHFCT_67929_cluster-9722_8_22
hsa-miR-5688 ggaaTTTGTTAaaga UAACAAAC m7a Disrupted HHFCT_67929_cluster-9722_8_22
hsa-miR-7-1-3p ggaATTTGTTaaaga CAACAAAU m7b Disrupted HHFCT_67929_cluster-9722_8_22
hsa-miR-7-2-3p ggaATTTGTTaaaga CAACAAAU m7b Disrupted HHFCT_67929_cluster-9722_8_22
hsa-miR-302b-5p ggaatttGTTAAAGa ACUUUAAC m7b Disrupted HHFKP_64156_cluster-9722_4_161
hsa-miR-302d-5p ggaatttGTTAAAGa ACUUUAAC m7b Disrupted HHFKP_64156_cluster-9722_4_161
hsa-miR-495-3p ggaaTTTGTTaaaga AAACAAAC m6b Disrupted HHFKP_64156_cluster-9722_4_161
hsa-miR-5688 ggaaTTTGTTAaaga UAACAAAC m7a Disrupted HHFKP_64156_cluster-9722_4_161
hsa-miR-7-1-3p ggaATTTGTTaaaga CAACAAAU m7b Disrupted HHFKP_64156_cluster-9722_4_161
hsa-miR-7-2-3p ggaATTTGTTaaaga CAACAAAU m7b Disrupted HHFKP_64156_cluster-9722_4_161

Mutation Mutation ID Sample Name Cancer Type
chr17:g.54912713G>C COSM1268301 ESO-682 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3919 agTCTCTGattgtga GCAGAGAA m6b Disrupted HHFCT_67928_cluster-9722_7_11
hsa-miR-4712-3p agtCTCTCATTgtga AAUGAGAG m8a Created HHFCT_67928_cluster-9722_7_11
hsa-miR-4756-3p agTCTCTGattgtga CCAGAGAU m6b Disrupted HHFCT_67928_cluster-9722_7_11
hsa-miR-3919 agTCTCTGattgtga GCAGAGAA m6b Disrupted HHFKP_64155_cluster-9722_3_268
hsa-miR-4712-3p agtCTCTCATTgtga AAUGAGAG m8a Created HHFKP_64155_cluster-9722_3_268
hsa-miR-4756-3p agTCTCTGattgtga CCAGAGAU m6b Disrupted HHFKP_64155_cluster-9722_3_268

Mutation Mutation ID Sample Name Cancer Type
chr17:g.54912711C>T COSM3519697 TCGA-EE-A2MJ-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3919 ccagTCTCTGattgt GCAGAGAA m6b Disrupted HHFCT_67928_cluster-9722_7_11
hsa-miR-4463 CCAGTCTCtgattgt GAGACUGG m8a Disrupted HHFCT_67928_cluster-9722_7_11
hsa-miR-4756-3p ccagTCTCTGattgt CCAGAGAU m6b Disrupted HHFCT_67928_cluster-9722_7_11
hsa-miR-548u ccAGTCTTTGattgt CAAAGACU m8a Created HHFCT_67928_cluster-9722_7_11
hsa-miR-7161-5p ccAGTCTTTgattgt UAAAGACU m7b (m6b->m7b) HHFCT_67928_cluster-9722_7_11
hsa-miR-3919 ccagTCTCTGattgt GCAGAGAA m6b Disrupted HHFKP_64155_cluster-9722_3_268
hsa-miR-4463 CCAGTCTCtgattgt GAGACUGG m8a Disrupted HHFKP_64155_cluster-9722_3_268
hsa-miR-4756-3p ccagTCTCTGattgt CCAGAGAU m6b Disrupted HHFKP_64155_cluster-9722_3_268
hsa-miR-548u ccAGTCTTTGattgt CAAAGACU m8a Created HHFKP_64155_cluster-9722_3_268
hsa-miR-7161-5p ccAGTCTTTgattgt UAAAGACU m7b (m6b->m7b) HHFKP_64155_cluster-9722_3_268

Mutation Mutation ID Sample Name Cancer Type
chr17:g.54912684C>T COSM3691696 TCGA-CM-6171-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-148b-5p gtgtgtgCAGAACTg AAGUUCUG m7b Disrupted HHFCT_67928_cluster-9722_7_11
hsa-miR-3130-3p gtgtGTGCAGaactg GCUGCACC m6b Disrupted HHFCT_67928_cluster-9722_7_11
hsa-miR-3168 gtgtgtgTAGAACTg GAGUUCUA m7b Created HHFCT_67928_cluster-9722_7_11
hsa-miR-329-3p gtGTGTGTagaactg AACACACC m6b Created HHFCT_67928_cluster-9722_7_11
hsa-miR-362-3p gtGTGTGTagaactg AACACACC m6b Created HHFCT_67928_cluster-9722_7_11
hsa-miR-3941 gtGTGTGTAgaactg UUACACAC m7b (m6b->m7b) HHFCT_67928_cluster-9722_7_11
hsa-miR-4793-3p gtgtGTGCAGAactg UCUGCACU m7a Disrupted HHFCT_67928_cluster-9722_7_11
hsa-miR-544a gtgtgTGCAGAActg AUUCUGCA m7b Disrupted HHFCT_67928_cluster-9722_7_11
hsa-miR-603 gtGTGTGTagaactg CACACACU m6b Created HHFCT_67928_cluster-9722_7_11
hsa-miR-6874-3p gtgtgtgCAGAACTg CAGUUCUG m7b Disrupted HHFCT_67928_cluster-9722_7_11
hsa-miR-148b-5p gtgtgtgCAGAACTg AAGUUCUG m7b Disrupted HHFKP_64155_cluster-9722_3_268
hsa-miR-3130-3p gtgtGTGCAGaactg GCUGCACC m6b Disrupted HHFKP_64155_cluster-9722_3_268
hsa-miR-3168 gtgtgtgTAGAACTg GAGUUCUA m7b Created HHFKP_64155_cluster-9722_3_268
hsa-miR-329-3p gtGTGTGTagaactg AACACACC m6b Created HHFKP_64155_cluster-9722_3_268
hsa-miR-362-3p gtGTGTGTagaactg AACACACC m6b Created HHFKP_64155_cluster-9722_3_268
hsa-miR-3941 gtGTGTGTAgaactg UUACACAC m7b (m6b->m7b) HHFKP_64155_cluster-9722_3_268
hsa-miR-4793-3p gtgtGTGCAGAactg UCUGCACU m7a Disrupted HHFKP_64155_cluster-9722_3_268
hsa-miR-544a gtgtgTGCAGAActg AUUCUGCA m7b Disrupted HHFKP_64155_cluster-9722_3_268
hsa-miR-603 gtGTGTGTagaactg CACACACU m6b Created HHFKP_64155_cluster-9722_3_268
hsa-miR-6874-3p gtgtgtgCAGAACTg CAGUUCUG m7b Disrupted HHFKP_64155_cluster-9722_3_268

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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