SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_003844
Gene Symbol: TNFRSF10A
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Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr8:g.23212182C>T COSM285841 TCGA-AA-A010-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8060 catcaaaCTTCATGa CCAUGAAG m7b Disrupted HPCB3_23201_G31855.1_23069707

Mutation Mutation ID Sample Name Cancer Type
chr8:g.23212179C>T COSM3647352 TCGA-EE-A2GC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-142-5p caaACTTTATGatca CAUAAAGU m8a Created HPCB3_23201_G31855.1_23069707
hsa-miR-5590-3p caaACTTTATgatca AAUAAAGU m7b Created HPCB3_23201_G31855.1_23069707
hsa-miR-561-3p cAAACTTTatgatca CAAAGUUU m7b Created HPCB3_23201_G31855.1_23069707
hsa-miR-7154-5p caaacTTCATGAtca UUCAUGAA m7b Disrupted HPCB3_23201_G31855.1_23069707
hsa-miR-8060 caaaCTTCATGatca CCAUGAAG m7b Disrupted HPCB3_23201_G31855.1_23069707

Mutation Mutation ID Sample Name Cancer Type
chr8:g.23202743A>G COSM3763264 PDA_024 [pancreas][NS][carcinoma][ductal_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1265 tcagaACATCCTGga CAGGAUGU m8a Disrupted HHFKP_138043_cluster-22273_6_233

Mutation Mutation ID Sample Name Cancer Type
chr8:g.23202740C>A COSM1098228 TCGA-BS-A0TJ-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1265 gaACATCCTGgagcc CAGGAUGU m8a Disrupted HHFKP_138043_cluster-22273_6_233
hsa-miR-665 gaacaTCCTGGagcc ACCAGGAG m6b Disrupted HHFKP_138043_cluster-22273_6_233

Mutation Mutation ID Sample Name Cancer Type
chr8:g.23202726C>A COSM1456150 TCGA-G4-6321-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-500a-3p ctgtaacAGGTGCAc AUGCACCU m7b Created HHFKP_138043_cluster-22273_6_233
hsa-miR-6804-3p ctgtaaCAGGTGCac CGCACCUG m7b Created HHFKP_138043_cluster-22273_6_233
Mutation Mutation ID Sample Name Cancer Type
chr8:g.23202725G>T COSM1193572 H441 [lung][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr8:g.23202725G>A COSM73030 TCGA-25-1329-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr8:g.23202701C>T COSM226193 ME024T [NS][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3171 ggtTACATCaatgct AGAUGUAU m6b Created HHFCT_149876_cluster-22273_6_10

Mutation Mutation ID Sample Name Cancer Type
chr8:g.23199372C>T COSM4800004 CHC1207T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4520-5p agcaACGCAGactcg CCUGCGUG m6b Disrupted HHFKP_138040_cluster-22273_3_10

Mutation Mutation ID Sample Name Cancer Type
chr8:g.23199366C>T COSM379450 LUAD-RT-S01702 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2277-3p gcagactCGCTGTCc UGACAGCG m7b Disrupted HHFKP_138040_cluster-22273_3_10
hsa-miR-3120-3p gcagacTTGCTGTcc CACAGCAA m7b Created HHFKP_138040_cluster-22273_3_10

Mutation Mutation ID Sample Name Cancer Type
chr8:g.23199345TGA>A COSM1456148 TCGA-AU-6004-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3692-5p tcgtctCAGCAGcaa CCUGCUGG m6b Created HHFKP_138040_cluster-22273_3_10
hsa-miR-3919 tcgTCTCTGagcagcaa GCAGAGAA m6b Disrupted HHFKP_138040_cluster-22273_3_10
hsa-miR-4251 tcgTCTCAGcagcaa CCUGAGAA m6b Created HHFKP_138040_cluster-22273_3_10
hsa-miR-4329 tcGTCTCAGcagcaa CCUGAGAC m7b (m6b->m7b) HHFKP_138040_cluster-22273_3_10
hsa-miR-4756-3p tcgTCTCTGagcagcaa CCAGAGAU m6b Disrupted HHFKP_138040_cluster-22273_3_10
hsa-miR-6761-5p tcgTCTCAGcagcaa UCUGAGAG m6b Created HHFKP_138040_cluster-22273_3_10
hsa-miR-767-3p tcgtctcTGAGCAGcaa UCUGCUCA m7b Disrupted HHFKP_138040_cluster-22273_3_10
hsa-miR-93-3p tcgtcTCAGCAGcaa ACUGCUGA m7b Created HHFKP_138040_cluster-22273_3_10

Mutation Mutation ID Sample Name Cancer Type
chr8:g.23197136T>C COSM4734855 T3498 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-194-3p acCCCACTGagagta CCAGUGGG m7b (m7b->m6b) HHFKP_138039_cluster-22273_2_8
hsa-miR-3615 accccaCCGAGAGta UCUCUCGG m7b Created HHFKP_138039_cluster-22273_2_8
hsa-miR-4264 accccACTGAGagta ACUCAGUC m6b Disrupted HHFKP_138039_cluster-22273_2_8
hsa-miR-4276 acccCACTGAGagta CUCAGUGA m7a Disrupted HHFKP_138039_cluster-22273_2_8
hsa-miR-5693 accCCACTGagagta GCAGUGGC m6b Disrupted HHFKP_138039_cluster-22273_2_8
hsa-miR-6786-5p acCCCACCGagagta GCGGUGGG m7b (m6b->m7b) HHFKP_138039_cluster-22273_2_8
hsa-miR-8088 accccACCGAGagta CCUCGGUA m6b Created HHFKP_138039_cluster-22273_2_8
hsa-miR-92a-2-5p aCCCCACCgagagta GGGUGGGG m7b Created HHFKP_138039_cluster-22273_2_8

Mutation Mutation ID Sample Name Cancer Type
chr8:g.23191865G>A COSM3647343 TCGA-EE-A3AA-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3617-3p caaTGCTGATGaaat CAUCAGCA m8a Disrupted HHFCT_149874_cluster-22273_4_12
hsa-miR-4310 cAATGCTGatgaaat GCAGCAUU m7b Disrupted HHFCT_149874_cluster-22273_4_12
hsa-miR-7157-5p cAATGCTGAtgaaat UCAGCAUU m8a (m8a->m7a) HHFCT_149874_cluster-22273_4_12

Mutation Mutation ID Sample Name Cancer Type
chr8:g.23191839G>A COSM4734854 T96 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4743-3p actgGACAGAAcgcc UUUCUGUC m7b Created HHFCT_149873_cluster-22273_3_13
hsa-miR-6888-3p actgGACAGAacgcc AUCUGUCU m6b Created HHFCT_149873_cluster-22273_3_13

Mutation Mutation ID Sample Name Cancer Type
chr8:g.23191838G>A COSM3647342 TCGA-EE-A2GB-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6854-3p ctggacGAAACGCct UGCGUUUC m7b Created HHFCT_149873_cluster-22273_3_13

Mutation Mutation ID Sample Name Cancer Type
chr8:g.23191623TA>A COSN1362840 HCC4T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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