SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_152588
Gene Symbol: TMTC2
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.83132804C>T COSN9479400 AOCS-135-3-1 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4655-3p agtgttACGAGGGag ACCCUCGU m7b Disrupted HHFCT_38499_cluster-5088_41_12
hsa-miR-6891-3p agtgttATGAGGGag CCCUCAUC m7a Created HHFCT_38499_cluster-5088_41_12
hsa-miR-4655-3p agtgttACGAGGGag ACCCUCGU m7b Disrupted HHFKP_37150_cluster-5088_20_8
hsa-miR-6891-3p agtgttATGAGGGag CCCUCAUC m7a Created HHFKP_37150_cluster-5088_20_8

Mutation Mutation ID Sample Name Cancer Type
chr12:g.83132365A>T COSM1188561 LC_C21 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7109-3p aaaaacaAGGCTTaa CAAGCCUC m6b Disrupted HHFCT_38496_cluster-5088_38_6
hsa-miR-4307 aAAAACATggcttaa AAUGUUUU m7b Created HHFCT_38496_cluster-5088_38_6
hsa-miR-4312 aaaaACAAGGCttaa GGCCUUGU m7b Disrupted HHFCT_38496_cluster-5088_38_6
hsa-miR-4716-5p aaaAACATGGcttaa UCCAUGUU m7b Created HHFCT_38496_cluster-5088_38_6

Mutation Mutation ID Sample Name Cancer Type
chr12:g.82695166G>T COSN8665136 SS6003149 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6875-3p ccggtgGGAAGAATg AUUCUUCC m8a Disrupted HHFCT_38462_cluster-5088_4_8
hsa-miR-1260a ccGGTGGGAagaatg AUCCCACC m7b (m7b->m6b) HHFCT_38462_cluster-5088_4_8
hsa-miR-1260b ccGGTGGGAagaatg AUCCCACC m7b (m7b->m6b) HHFCT_38462_cluster-5088_4_8
hsa-miR-188-3p ccgGTGGGAagaatg CUCCCACA m6b Disrupted HHFCT_38462_cluster-5088_4_8
hsa-miR-3156-3p ccgGTGGGAagaatg CUCCCACU m6b Disrupted HHFCT_38462_cluster-5088_4_8

Mutation Mutation ID Sample Name Cancer Type
chr12:g.82688630G>C COSN9479283 AOCS-056-1-X [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-188-5p atattAGGGATaaca CAUCCCUU m6b Disrupted HHFCT_38459_cluster-5088_1_6
hsa-miR-6866-3p atattAGGGATaaca GAUCCCUU m6b Disrupted HHFCT_38459_cluster-5088_1_6

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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