SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_138385
Gene Symbol: TMEM129
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.1718486C>A COSM4625261 DLD1 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3654 ctgGTCCAGTgaccg GACUGGAC m7b Created HHFKP_105716_cluster-17472_3_17
hsa-miR-4776-5p cTGGTCCAgtgaccg GUGGACCA m7b Created HHFKP_105716_cluster-17472_3_17
hsa-miR-653-3p ctggtCCAGTGAccg UUCACUGG m7b Created HHFKP_105716_cluster-17472_3_17
hsa-miR-3654 ctgGTCCAGTgaccg GACUGGAC m7b Created HHFKP_105716_cluster-17472_3_17
hsa-miR-4776-5p cTGGTCCAgtgaccg GUGGACCA m7b Created HHFKP_105716_cluster-17472_3_17
hsa-miR-653-3p ctggtCCAGTGAccg UUCACUGG m7b Created HHFKP_105716_cluster-17472_3_17
Mutation Mutation ID Sample Name Cancer Type
chr4:g.1716875C>G COSN9007076 8051710 [pancreas][NS][carcinoid-endocrine_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr4:g.1716360C>A COSN6813404 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1237-5p tgcaCGCCCCCtgtg CGGGGGCG m7b Disrupted HHKTA_31658_NM_001127266|2415|2454|2.33646881679488|1.19888789069454
hsa-miR-1268a tgCACGCCCcctgtg CGGGCGUG m7b (m7b->m6b) HHKTA_31658_NM_001127266|2415|2454|2.33646881679488|1.19888789069454
hsa-miR-1268b tgCACGCCCcctgtg CGGGCGUG m7b (m7b->m6b) HHKTA_31658_NM_001127266|2415|2454|2.33646881679488|1.19888789069454
hsa-miR-4488 tgcaCGCCCCCTgtg AGGGGGCG m8a Disrupted HHKTA_31658_NM_001127266|2415|2454|2.33646881679488|1.19888789069454
hsa-miR-4697-5p tgcaCGCCCCCTgtg AGGGGGCG m8a Disrupted HHKTA_31658_NM_001127266|2415|2454|2.33646881679488|1.19888789069454
hsa-miR-6798-5p tgcacgCCCCCTGtg CCAGGGGG m7b Disrupted HHKTA_31658_NM_001127266|2415|2454|2.33646881679488|1.19888789069454
hsa-miR-6805-5p tgcacGCCCCCTgtg UAGGGGGC m7b Disrupted HHKTA_31658_NM_001127266|2415|2454|2.33646881679488|1.19888789069454

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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