SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0036134
Gene Symbol: THSD4
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr15:g.71242892G>A COSM4897132 TCGA-RP-A695-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-17-3p gACTGCAGgctgcgg ACUGCAGU m7b Disrupted HHFCT_53527_cluster-7456_16_8
hsa-miR-4327 gacTGCAAGCtgcgg GGCUUGCA m7b Created HHFCT_53527_cluster-7456_16_8
hsa-miR-596 gactGCAGGCTgcgg AAGCCUGC m7b Disrupted HHFCT_53527_cluster-7456_16_8

Mutation Mutation ID Sample Name Cancer Type
chr15:g.71242878C>T COSM3887389 ESCC-237T [oesophagus][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6501-3p tggccctTGCTCTGg CCAGAGCA m7b Created HHFCT_53527_cluster-7456_16_8

Mutation Mutation ID Sample Name Cancer Type
chr15:g.71242866G>A COSM4901319 TCGA-GF-A6C9-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6760-3p ccaaagtGACAGTGg ACACUGUC m7b Disrupted HHFCT_53527_cluster-7456_16_8
hsa-miR-6773-3p ccaaaGTGACAGTgg ACUGUCAC m8a Disrupted HHFCT_53527_cluster-7456_16_8
hsa-miR-1208 ccaaagtAACAGTGg UCACUGUU m7b Created HHFCT_53527_cluster-7456_16_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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