SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0071704
Gene Symbol: TERT
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr5:g.1264475C>T COSM1060228 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6781-5p tgCCGGCCCacggcc CGGGCCGG m7b (m7b->m6b) HHFCT_121573_cluster-18479_2_8
hsa-miR-6877-5p tgcCGGCCCacggcc AGGGCCGA m6b Disrupted HHFCT_121573_cluster-18479_2_8
hsa-miR-6781-5p tgCCGGCCCacggcc CGGGCCGG m7b (m7b->m6b) HHFCT_121573_cluster-18479_2_8
hsa-miR-6877-5p tgcCGGCCCacggcc AGGGCCGA m6b Disrupted HHFCT_121573_cluster-18479_2_8

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1264472C>T COSM3414545 NYU1363 [pleura][NS][mesothelioma][epithelial]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1295a cggcccaCGGCCTAt UUAGGCCG m7b Disrupted HHFCT_121573_cluster-18479_2_8
hsa-miR-15a-3p cggcccATGGCCTat CAGGCCAU m7b Created HHFCT_121573_cluster-18479_2_8
hsa-miR-4529-5p cggcccATGGCCTat AGGCCAUC m7a Created HHFCT_121573_cluster-18479_2_8
hsa-miR-5704 cggcccaTGGCCTAt UUAGGCCA m7b Created HHFCT_121573_cluster-18479_2_8
hsa-miR-1295a cggcccaCGGCCTAt UUAGGCCG m7b Disrupted HHFCT_121573_cluster-18479_2_8
hsa-miR-15a-3p cggcccATGGCCTat CAGGCCAU m7b Created HHFCT_121573_cluster-18479_2_8
hsa-miR-4529-5p cggcccATGGCCTat AGGCCAUC m7a Created HHFCT_121573_cluster-18479_2_8
hsa-miR-5704 cggcccaTGGCCTAt UUAGGCCA m7b Created HHFCT_121573_cluster-18479_2_8

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1264463C>T COSM3608115 TCGA-EE-A2M5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5584-5p gcctaTTTCCCTGgt CAGGGAAA m8a Created HHFCT_121573_cluster-18479_2_8
hsa-miR-6783-5p gcctaTTCCCCTggt UAGGGGAA m7b Disrupted HHFCT_121573_cluster-18479_2_8
hsa-miR-7113-5p gcctattTCCCTGGt UCCAGGGA m7b Created HHFCT_121573_cluster-18479_2_8
hsa-miR-5584-5p gcctaTTTCCCTGgt CAGGGAAA m8a Created HHFCT_121573_cluster-18479_2_8
hsa-miR-6783-5p gcctaTTCCCCTggt UAGGGGAA m7b Disrupted HHFCT_121573_cluster-18479_2_8
hsa-miR-7113-5p gcctattTCCCTGGt UCCAGGGA m7b Created HHFCT_121573_cluster-18479_2_8

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1264461C>T COSM4484239 CSCC-29-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3125 ctaTTCCTCTggtgc UAGAGGAA m7b Created HHFCT_121573_cluster-18479_2_8
hsa-miR-3916 ctaTTCCTCTggtgc AAGAGGAA m7b Created HHFCT_121573_cluster-18479_2_8
hsa-miR-4733-3p ctattccCCTGGTGc CCACCAGG m7b Disrupted HHFCT_121573_cluster-18479_2_8
hsa-miR-6753-5p ctattcCCCTGGTGc CACCAGGG m8a Disrupted HHFCT_121573_cluster-18479_2_8
hsa-miR-6783-5p ctaTTCCCCTggtgc UAGGGGAA m7b Disrupted HHFCT_121573_cluster-18479_2_8
hsa-miR-6847-5p ctatTCCTCTGgtgc ACAGAGGA m7b Created HHFCT_121573_cluster-18479_2_8
hsa-miR-6859-5p ctaTTCCTCTggtgc GAGAGGAA m7b Created HHFCT_121573_cluster-18479_2_8
hsa-miR-3125 ctaTTCCTCTggtgc UAGAGGAA m7b Created HHFCT_121573_cluster-18479_2_8
hsa-miR-3916 ctaTTCCTCTggtgc AAGAGGAA m7b Created HHFCT_121573_cluster-18479_2_8
hsa-miR-4733-3p ctattccCCTGGTGc CCACCAGG m7b Disrupted HHFCT_121573_cluster-18479_2_8
hsa-miR-6753-5p ctattcCCCTGGTGc CACCAGGG m8a Disrupted HHFCT_121573_cluster-18479_2_8
hsa-miR-6783-5p ctaTTCCCCTggtgc UAGGGGAA m7b Disrupted HHFCT_121573_cluster-18479_2_8
hsa-miR-6847-5p ctatTCCTCTGgtgc ACAGAGGA m7b Created HHFCT_121573_cluster-18479_2_8
hsa-miR-6859-5p ctaTTCCTCTggtgc GAGAGGAA m7b Created HHFCT_121573_cluster-18479_2_8

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1264454C>T COSM1567527 TCGA-G5-6235-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1972 cctggtgTGGCCTGc UCAGGCCA m7b Created HHFCT_121573_cluster-18479_2_8
hsa-miR-4717-5p cctggtGTGGCCTgc UAGGCCAC m7b Created HHFCT_121573_cluster-18479_2_8
hsa-miR-1972 cctggtgTGGCCTGc UCAGGCCA m7b Created HHFCT_121573_cluster-18479_2_8
hsa-miR-4717-5p cctggtGTGGCCTgc UAGGCCAC m7b Created HHFCT_121573_cluster-18479_2_8

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1264453G>A COSM735866 TCGA-22-5491-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3130-3p ctGGTGCAGCctgct GCUGCACC m8a Created HHFCT_121573_cluster-18479_2_8
hsa-miR-3130-3p ctGGTGCAGCctgct GCUGCACC m8a Created HHFCT_121573_cluster-18479_2_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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