SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0068055
Gene Symbol: TBL1XR1
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.177050104A>G COSM4953511 CHC799T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6862-3p gaatcttGGTGAGaa CCUCACCC m6b Created HHFCT_107717_cluster-16878_55_18
hsa-miR-1229-3p gaatcttGGTGAGAa CUCUCACC m7b Created HHFCT_107717_cluster-16878_55_18
hsa-miR-1304-3p gaatcttAGTGAGAa UCUCACUG m7a Disrupted HHFCT_107717_cluster-16878_55_18
hsa-miR-6511a-3p gaatctTGGTGAGaa CCUCACCA m7b Created HHFCT_107717_cluster-16878_55_18
hsa-miR-6511b-3p gaatctTGGTGAGaa CCUCACCA m7b Created HHFCT_107717_cluster-16878_55_18
hsa-miR-6784-3p gaatcttGGTGAGAa UCUCACCC m7a Created HHFCT_107717_cluster-16878_55_18

Mutation Mutation ID Sample Name Cancer Type
chr3:g.177050103G>A COSM4440707 2292390 [haematopoietic_and_lymphoid_tissue][central_nervous_system][lymphoid_neoplasm][primary_central_nervous_system_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1304-3p aatcttAGTGAGAac UCUCACUG m7a Disrupted HHFCT_107717_cluster-16878_55_18
hsa-miR-6758-3p aatcttAATGAGaac ACUCAUUC m6b Created HHFCT_107717_cluster-16878_55_18
hsa-miR-1229-3p aatcttaGTGAGAac CUCUCACC m6b Disrupted HHFCT_107717_cluster-16878_55_18

Mutation Mutation ID Sample Name Cancer Type
chr3:g.177050084GC>C COSM1235256 18D [haematopoietic_and_lymphoid_tissue][spleen][lymphoid_neoplasm][marginal_zone_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4252 acCAGTGGCtctacac GGCCACUG m7b (m7b->m6b) HHFCT_107717_cluster-16878_55_18
hsa-miR-4732-5p accagtgGCTCTACAc UGUAGAGC m8a Disrupted HHFCT_107717_cluster-16878_55_18

Mutation Mutation ID Sample Name Cancer Type
chr3:g.177050071G>A COSM3719752 PD5165a [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][polycythaemia_vera]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4637 acAGTTAGTActtag UACUAACU m8a Disrupted HHFCT_107717_cluster-16878_55_18

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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