SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001055
Gene Symbol: SULT1A1
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.28605868G>A COSM3932308 B63-Tumor [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3605-3p ggactatACGGAGaa CCUCCGUG m6b Created HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-3605-3p ggactatACGGAGaa CCUCCGUG m6b Created HHRBL_5617_BCBL1-2of3-SCL_5135

Mutation Mutation ID Sample Name Cancer Type
chr16:g.28605866G>A COSM1377152 TCGA-CM-6162-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-20a-3p actATGCAGagaaga ACUGCAUU m6b Created HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-3191-5p actatgCAGAGAaga CUCUCUGG m6b Created HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-6728-3p actatGCAGAGAaga UCUCUGCU m7a Created HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-6809-3p actatgcAGAGAAGa CUUCUCUU m7a Created HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-942-5p actatgcAGAGAAGa UCUUCUCU m7b Created HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-153-3p aCTATGCAgagaaga UUGCAUAG m7b Created HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-20a-3p actATGCAGagaaga ACUGCAUU m6b Created HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-3191-5p actatgCAGAGAaga CUCUCUGG m6b Created HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-6728-3p actatGCAGAGAaga UCUCUGCU m7a Created HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-6809-3p actatgcAGAGAAGa CUUCUCUU m7a Created HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-942-5p actatgcAGAGAAGa UCUUCUCU m7b Created HHRBL_5617_BCBL1-2of3-SCL_5135

Mutation Mutation ID Sample Name Cancer Type
chr16:g.28605831C>T COSM4511730 CSCC-40-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-330-3p ttccGCTTTGagctg GCAAAGCA m6b Created HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-518b ttcCGCTTTGagctg CAAAGCGC m7a Created HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-518c-3p ttcCGCTTTGagctg CAAAGCGC m7a Created HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-518d-3p ttcCGCTTTGagctg CAAAGCGC m7a Created HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-6501-3p ttccGCTCTGagctg CCAGAGCA m6b Disrupted HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-6854-5p ttccgctCTGAGCTg AAGCUCAG m7b Disrupted HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-330-3p ttccGCTTTGagctg GCAAAGCA m6b Created HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-518b ttcCGCTTTGagctg CAAAGCGC m7a Created HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-518c-3p ttcCGCTTTGagctg CAAAGCGC m7a Created HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-518d-3p ttcCGCTTTGagctg CAAAGCGC m7a Created HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-6501-3p ttccGCTCTGagctg CCAGAGCA m6b Disrupted HHRBL_5617_BCBL1-2of3-SCL_5135
hsa-miR-6854-5p ttccgctCTGAGCTg AAGCUCAG m7b Disrupted HHRBL_5617_BCBL1-2of3-SCL_5135

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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