SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0051611
Gene Symbol: STRN4
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.46720631G>A COSM1612458 BN24T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1202 tGCTGGCACtgatgc GUGCCAGC m8a (m7a->m8a) HHHNE_18267_STRN4|NM_001039877|exon_CDS|-5.22186739314458|-0.0428332029257091
hsa-miR-33b-3p tgctGGCACTGatgc CAGUGCCU m7a Created HHHNE_18267_STRN4|NM_001039877|exon_CDS|-5.22186739314458|-0.0428332029257091
hsa-miR-3972 tGCTGGCActgatgc CUGCCAGC m7b Created HHHNE_18267_STRN4|NM_001039877|exon_CDS|-5.22186739314458|-0.0428332029257091
hsa-miR-5094 tgctggCACTGATgc AAUCAGUG m7b Created HHHNE_18267_STRN4|NM_001039877|exon_CDS|-5.22186739314458|-0.0428332029257091
hsa-miR-1202 tGCTGGCACtgatgc GUGCCAGC m8a (m7a->m8a) HHHSE_18267_STRN4|NM_001039877|exon_CDS|-5.22186739314458|-0.0428332029257091
hsa-miR-33b-3p tgctGGCACTGatgc CAGUGCCU m7a Created HHHSE_18267_STRN4|NM_001039877|exon_CDS|-5.22186739314458|-0.0428332029257091
hsa-miR-3972 tGCTGGCActgatgc CUGCCAGC m7b Created HHHSE_18267_STRN4|NM_001039877|exon_CDS|-5.22186739314458|-0.0428332029257091
hsa-miR-5094 tgctggCACTGATgc AAUCAGUG m7b Created HHHSE_18267_STRN4|NM_001039877|exon_CDS|-5.22186739314458|-0.0428332029257091
hsa-miR-1202 tGCTGGCACtgatgc GUGCCAGC m8a (m7a->m8a) HHHNE_18267_STRN4|NM_001039877|exon_CDS|-5.22186739314458|-0.0428332029257091
hsa-miR-33b-3p tgctGGCACTGatgc CAGUGCCU m7a Created HHHNE_18267_STRN4|NM_001039877|exon_CDS|-5.22186739314458|-0.0428332029257091
hsa-miR-3972 tGCTGGCActgatgc CUGCCAGC m7b Created HHHNE_18267_STRN4|NM_001039877|exon_CDS|-5.22186739314458|-0.0428332029257091
hsa-miR-5094 tgctggCACTGATgc AAUCAGUG m7b Created HHHNE_18267_STRN4|NM_001039877|exon_CDS|-5.22186739314458|-0.0428332029257091
hsa-miR-1202 tGCTGGCACtgatgc GUGCCAGC m8a (m7a->m8a) HHHSE_18267_STRN4|NM_001039877|exon_CDS|-5.22186739314458|-0.0428332029257091
hsa-miR-33b-3p tgctGGCACTGatgc CAGUGCCU m7a Created HHHSE_18267_STRN4|NM_001039877|exon_CDS|-5.22186739314458|-0.0428332029257091
hsa-miR-3972 tGCTGGCActgatgc CUGCCAGC m7b Created HHHSE_18267_STRN4|NM_001039877|exon_CDS|-5.22186739314458|-0.0428332029257091
hsa-miR-5094 tgctggCACTGATgc AAUCAGUG m7b Created HHHSE_18267_STRN4|NM_001039877|exon_CDS|-5.22186739314458|-0.0428332029257091

Mutation Mutation ID Sample Name Cancer Type
chr19:g.46719730A>G COSN1769789 RK065_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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