SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0060526
Gene Symbol: STK4
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr20:g.45025096A>G COSM3726736 345973 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4714-3p tcttcAGGTTGGaaa CCAACCUA m7a Created HPSEF_13797_G16613.1_43653739
hsa-miR-4714-3p tcttcAGGTTGGaaa CCAACCUA m7a Created HPSEF_13797_G16613.1_43653739

Mutation Mutation ID Sample Name Cancer Type
chr20:g.45001273A>C COSM3723736 600 [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7i-3p atgaTTGCGCAcgat CUGCGCAA m7b Created HHFCT_96558_cluster-14424_7_898
hsa-miR-7158-5p atgATTGAGCacgat GGCUCAAU m7b Disrupted HHFCT_96558_cluster-14424_7_898
hsa-miR-933 atgatTGCGCACgat UGUGCGCA m7b Created HHFCT_96558_cluster-14424_7_898
hsa-let-7i-3p atgaTTGCGCAcgat CUGCGCAA m7b Created HHFKP_89761_cluster-14424_6_72
hsa-miR-7158-5p atgATTGAGCacgat GGCUCAAU m7b Disrupted HHFKP_89761_cluster-14424_6_72
hsa-miR-933 atgatTGCGCACgat UGUGCGCA m7b Created HHFKP_89761_cluster-14424_6_72
hsa-let-7i-3p atgaTTGCGCAcgat CUGCGCAA m7b Created HHFCT_96558_cluster-14424_7_898
hsa-miR-7158-5p atgATTGAGCacgat GGCUCAAU m7b Disrupted HHFCT_96558_cluster-14424_7_898
hsa-miR-933 atgatTGCGCACgat UGUGCGCA m7b Created HHFCT_96558_cluster-14424_7_898
hsa-let-7i-3p atgaTTGCGCAcgat CUGCGCAA m7b Created HHFKP_89761_cluster-14424_6_72
hsa-miR-7158-5p atgATTGAGCacgat GGCUCAAU m7b Disrupted HHFKP_89761_cluster-14424_6_72
hsa-miR-933 atgatTGCGCACgat UGUGCGCA m7b Created HHFKP_89761_cluster-14424_6_72

Mutation Mutation ID Sample Name Cancer Type
chr20:g.45001254G>T COSM1227897 587228 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-24-3p gactgatTGAGCCAa UGGCUCAG m7a Created HHFCT_96558_cluster-14424_7_898
hsa-miR-34a-3p gaCTGATTGagccaa CAAUCAGC m7a (m6a->m7a) HHFCT_96558_cluster-14424_7_898
hsa-miR-4284 gactgatTGAGCCaa GGGCUCAC m6b Created HHFCT_96558_cluster-14424_7_898
hsa-miR-6884-3p gacTGATGGagccaa CCCAUCAC m6b Disrupted HHFCT_96558_cluster-14424_7_898
hsa-miR-7158-5p gactgATTGAGCCaa GGCUCAAU m8a Created HHFCT_96558_cluster-14424_7_898
hsa-miR-24-3p gactgatTGAGCCAa UGGCUCAG m7a Created HPSEF_13795_G16611.1_43629901
hsa-miR-34a-3p gaCTGATTGagccaa CAAUCAGC m7a (m6a->m7a) HPSEF_13795_G16611.1_43629901
hsa-miR-4284 gactgatTGAGCCaa GGGCUCAC m6b Created HPSEF_13795_G16611.1_43629901
hsa-miR-6884-3p gacTGATGGagccaa CCCAUCAC m6b Disrupted HPSEF_13795_G16611.1_43629901
hsa-miR-7158-5p gactgATTGAGCCaa GGCUCAAU m8a Created HPSEF_13795_G16611.1_43629901
hsa-miR-24-3p gactgatTGAGCCAa UGGCUCAG m7a Created HHFCT_96558_cluster-14424_7_898
hsa-miR-34a-3p gaCTGATTGagccaa CAAUCAGC m7a (m6a->m7a) HHFCT_96558_cluster-14424_7_898
hsa-miR-4284 gactgatTGAGCCaa GGGCUCAC m6b Created HHFCT_96558_cluster-14424_7_898
hsa-miR-6884-3p gacTGATGGagccaa CCCAUCAC m6b Disrupted HHFCT_96558_cluster-14424_7_898
hsa-miR-7158-5p gactgATTGAGCCaa GGCUCAAU m8a Created HHFCT_96558_cluster-14424_7_898
hsa-miR-24-3p gactgatTGAGCCAa UGGCUCAG m7a Created HPSEF_13795_G16611.1_43629901
hsa-miR-34a-3p gaCTGATTGagccaa CAAUCAGC m7a (m6a->m7a) HPSEF_13795_G16611.1_43629901
hsa-miR-4284 gactgatTGAGCCaa GGGCUCAC m6b Created HPSEF_13795_G16611.1_43629901
hsa-miR-6884-3p gacTGATGGagccaa CCCAUCAC m6b Disrupted HPSEF_13795_G16611.1_43629901
hsa-miR-7158-5p gactgATTGAGCCaa GGCUCAAU m8a Created HPSEF_13795_G16611.1_43629901

Mutation Mutation ID Sample Name Cancer Type
chr20:g.44978560G>A COSM1027143 TCGA-AP-A051-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4684-3p taaTGCAACAatgtg UGUUGCAA m7a Created HHFCT_96554_cluster-14424_3_19
hsa-miR-744-3p taatGCAACAatgtg CUGUUGCC m6b Created HHFCT_96554_cluster-14424_3_19
hsa-miR-4684-3p taaTGCAACAatgtg UGUUGCAA m7a Created HHFKP_89757_cluster-14424_2_15
hsa-miR-744-3p taatGCAACAatgtg CUGUUGCC m6b Created HHFKP_89757_cluster-14424_2_15
hsa-miR-4684-3p taaTGCAACAatgtg UGUUGCAA m7a Created HPSEF_13791_G16606.1_43607199
hsa-miR-744-3p taatGCAACAatgtg CUGUUGCC m6b Created HPSEF_13791_G16606.1_43607199
hsa-miR-4684-3p taaTGCAACAatgtg UGUUGCAA m7a Created HPTA1_7223_G10224.1_43607198
hsa-miR-744-3p taatGCAACAatgtg CUGUUGCC m6b Created HPTA1_7223_G10224.1_43607198
hsa-miR-4684-3p taaTGCAACAatgtg UGUUGCAA m7a Created HHFCT_96554_cluster-14424_3_19
hsa-miR-744-3p taatGCAACAatgtg CUGUUGCC m6b Created HHFCT_96554_cluster-14424_3_19
hsa-miR-4684-3p taaTGCAACAatgtg UGUUGCAA m7a Created HHFKP_89757_cluster-14424_2_15
hsa-miR-744-3p taatGCAACAatgtg CUGUUGCC m6b Created HHFKP_89757_cluster-14424_2_15
hsa-miR-4684-3p taaTGCAACAatgtg UGUUGCAA m7a Created HPSEF_13791_G16606.1_43607199
hsa-miR-744-3p taatGCAACAatgtg CUGUUGCC m6b Created HPSEF_13791_G16606.1_43607199
hsa-miR-4684-3p taaTGCAACAatgtg UGUUGCAA m7a Created HPTA1_7223_G10224.1_43607198
hsa-miR-744-3p taatGCAACAatgtg CUGUUGCC m6b Created HPTA1_7223_G10224.1_43607198

Mutation Mutation ID Sample Name Cancer Type
chr20:g.44978539C>A COSM3841098 TCGA-AN-A046-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4795-3p agATAATAaaagaaa AUAUUAUU m6b Created HHFCT_96554_cluster-14424_3_19
hsa-miR-6844 agataatCAAAGAAa UUCUUUGU m7a Disrupted HHFCT_96554_cluster-14424_3_19
hsa-miR-4795-3p agATAATAaaagaaa AUAUUAUU m6b Created HPRO6_48728_G57791.1_43607197
hsa-miR-6844 agataatCAAAGAAa UUCUUUGU m7a Disrupted HPRO6_48728_G57791.1_43607197
hsa-miR-4795-3p agATAATAaaagaaa AUAUUAUU m6b Created HHFCT_96554_cluster-14424_3_19
hsa-miR-6844 agataatCAAAGAAa UUCUUUGU m7a Disrupted HHFCT_96554_cluster-14424_3_19
hsa-miR-4795-3p agATAATAaaagaaa AUAUUAUU m6b Created HPRO6_48728_G57791.1_43607197
hsa-miR-6844 agataatCAAAGAAa UUCUUUGU m7a Disrupted HPRO6_48728_G57791.1_43607197

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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