SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0057568
Gene Symbol: STK17B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.196143652T>A COSM572773 TCGA-75-5126-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4740-3p tacccTCTCGGGgac GCCCGAGA m7b Disrupted HPRO6_47431_G56241.1_197008389

Mutation Mutation ID Sample Name Cancer Type
chr2:g.196143650G>A COSM4139149 AOCS-120-3-6 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125a-5p ccctCTCAGGGAcat UCCCUGAG m8a Created HPRO6_47431_G56241.1_197008389
hsa-miR-125b-5p ccctCTCAGGGAcat UCCCUGAG m8a Created HPRO6_47431_G56241.1_197008389
hsa-miR-345-3p ccctcTCAGGGacat GCCCUGAA m6b Created HPRO6_47431_G56241.1_197008389
hsa-miR-4319 ccctCTCAGGGAcat UCCCUGAG m8a Created HPRO6_47431_G56241.1_197008389
hsa-miR-4324 cccTCTCAGGGacat CCCUGAGA m8a Created HPRO6_47431_G56241.1_197008389
hsa-miR-4732-3p ccctcTCAGGGacat GCCCUGAC m6b Created HPRO6_47431_G56241.1_197008389
hsa-miR-4740-3p cccTCTCGGGgacat GCCCGAGA m7b Disrupted HPRO6_47431_G56241.1_197008389
hsa-miR-670-5p ccctcTCAGGGACat GUCCCUGA m8a Created HPRO6_47431_G56241.1_197008389
hsa-miR-6761-5p ccCTCTCAGggacat UCUGAGAG m7b (m6b->m7b) HPRO6_47431_G56241.1_197008389

Mutation Mutation ID Sample Name Cancer Type
chr2:g.196143647G>A COSM4551171 CSCC-31-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-33a-3p tctcgggAACATTaa CAAUGUUU m6b Created HPRO6_47431_G56241.1_197008389
hsa-miR-409-3p tctcgggAACATTaa GAAUGUUG m6b Created HPRO6_47431_G56241.1_197008389
hsa-miR-513b-3p tctcgggGACATTaa AAAUGUCA m6b Disrupted HPRO6_47431_G56241.1_197008389
hsa-miR-642b-5p tctcGGGAACattaa GGUUCCCU m6b Created HPRO6_47431_G56241.1_197008389
hsa-miR-6834-3p tctcgGGGACATtaa UAUGUCCC m7b Disrupted HPRO6_47431_G56241.1_197008389

Mutation Mutation ID Sample Name Cancer Type
chr2:g.196143601C>T COSM4441196 C113 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-377-3p gggcatgTGTGTGAa AUCACACA m7b Created HPTA1_7022_G9929.1_197008327
hsa-miR-4643 gggCATGTGTgtgaa GACACAUG m7b Created HPTA1_7022_G9929.1_197008327
hsa-miR-603 gggcatGTGTGTGaa CACACACU m7a Created HPTA1_7022_G9929.1_197008327
hsa-miR-8485 gggcaTGTGTGTGaa CACACACA m8a Created HPTA1_7022_G9929.1_197008327
hsa-miR-377-3p gggcatgTGTGTGAa AUCACACA m7b Created HPTA3_11530_G18216.1_197008328
hsa-miR-4643 gggCATGTGTgtgaa GACACAUG m7b Created HPTA3_11530_G18216.1_197008328
hsa-miR-603 gggcatGTGTGTGaa CACACACU m7a Created HPTA3_11530_G18216.1_197008328
hsa-miR-8485 gggcaTGTGTGTGaa CACACACA m8a Created HPTA3_11530_G18216.1_197008328

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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