SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_152996
Gene Symbol: ST6GALNAC3
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.76628805G>C COSM536352 TCGA-44-2662-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.76628775T>A COSM315616 S01563 [lung][NS][carcinoma][small_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3606-3p aggataAAATTTaca AAAAUUUC m6b Created HHKTA_44596_NM_152996|1044|1083|1.64418175996677|0.175642907609677
hsa-miR-590-3p aggaTAAAATTtaca UAAUUUUA m7b Created HHKTA_44596_NM_152996|1044|1083|1.64418175996677|0.175642907609677
hsa-miR-656-3p aggATAATATTtaca AAUAUUAU m8a Disrupted HHKTA_44596_NM_152996|1044|1083|1.64418175996677|0.175642907609677

Mutation Mutation ID Sample Name Cancer Type
chr1:g.76313899A>G COSM3805894 TCGA-BH-A18G-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-646 ctactaAGCTGCTTt AAGCAGCU m8a Created HPRT3_515_G690.1_76779586
hsa-miR-646 ctactaAGCTGCTTt AAGCAGCU m8a Created HPKTA_1295_G1393.1_76779574

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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