SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0021349
Gene Symbol: SOX6
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.16318627C>A COSM466607 TCGA-EU-5906-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-135a-3p tatgtTCCCTATAtt UAUAGGGA m8a Disrupted HHFKP_23162_cluster-4104_11_30
hsa-miR-3606-5p tatgTTCACTAtatt UUAGUGAA m7b Created HHFKP_23162_cluster-4104_11_30
hsa-miR-5584-5p tatgTTCCCTatatt CAGGGAAA m6b Disrupted HHFKP_23162_cluster-4104_11_30
hsa-miR-6750-5p tatGTTCCCTatatt CAGGGAAC m7b Disrupted HHFKP_23162_cluster-4104_11_30
hsa-miR-6822-5p tatGTTCCCTatatt CAGGGAAC m7b Disrupted HHFKP_23162_cluster-4104_11_30
hsa-miR-9500 tatgTTCCCTatatt AAGGGAAG m6b Disrupted HHFKP_23162_cluster-4104_11_30
hsa-miR-135a-3p tatgtTCCCTATAtt UAUAGGGA m8a Disrupted HHFKP_23162_cluster-4104_11_30
hsa-miR-3606-5p tatgTTCACTAtatt UUAGUGAA m7b Created HHFKP_23162_cluster-4104_11_30
hsa-miR-5584-5p tatgTTCCCTatatt CAGGGAAA m6b Disrupted HHFKP_23162_cluster-4104_11_30
hsa-miR-6750-5p tatGTTCCCTatatt CAGGGAAC m7b Disrupted HHFKP_23162_cluster-4104_11_30
hsa-miR-6822-5p tatGTTCCCTatatt CAGGGAAC m7b Disrupted HHFKP_23162_cluster-4104_11_30
hsa-miR-9500 tatgTTCCCTatatt AAGGGAAG m6b Disrupted HHFKP_23162_cluster-4104_11_30

Mutation Mutation ID Sample Name Cancer Type
chr11:g.16318618C>T COSM3445719 TCGA-EE-A2MJ-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1252-5p tataTTCCTTCcgaa AGAAGGAA m7b Disrupted HHFKP_23162_cluster-4104_11_30
hsa-miR-186-5p tatATTCTTTccgaa CAAAGAAU m7b Created HHFKP_23162_cluster-4104_11_30
hsa-miR-4533 tatatTCCTTCCgaa UGGAAGGA m7b Disrupted HHFKP_23162_cluster-4104_11_30
hsa-miR-6125 tatattCCTTCCGaa GCGGAAGG m7b Disrupted HHFKP_23162_cluster-4104_11_30
hsa-miR-6507-5p taTATTCTTtccgaa GAAGAAUA m7b (m6b->m7b) HHFKP_23162_cluster-4104_11_30
hsa-miR-1252-5p tataTTCCTTCcgaa AGAAGGAA m7b Disrupted HHFKP_23162_cluster-4104_11_30
hsa-miR-186-5p tatATTCTTTccgaa CAAAGAAU m7b Created HHFKP_23162_cluster-4104_11_30
hsa-miR-4533 tatatTCCTTCCgaa UGGAAGGA m7b Disrupted HHFKP_23162_cluster-4104_11_30
hsa-miR-6125 tatattCCTTCCGaa GCGGAAGG m7b Disrupted HHFKP_23162_cluster-4104_11_30
hsa-miR-6507-5p taTATTCTTtccgaa GAAGAAUA m7b (m6b->m7b) HHFKP_23162_cluster-4104_11_30

Mutation Mutation ID Sample Name Cancer Type
chr11:g.16318614C>T COSM1227182 587224 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-205-3p ttccttCTGAAATac GAUUUCAG m7b Created HHFKP_23162_cluster-4104_11_30
hsa-miR-3154 ttCCTTCTGaaatac CAGAAGGG m7a (m6a->m7a) HHFKP_23162_cluster-4104_11_30
hsa-miR-6125 ttCCTTCCGaaatac GCGGAAGG m7b (m7b->m6b) HHFKP_23162_cluster-4104_11_30
hsa-miR-205-3p ttccttCTGAAATac GAUUUCAG m7b Created HHFKP_23162_cluster-4104_11_30
hsa-miR-3154 ttCCTTCTGaaatac CAGAAGGG m7a (m6a->m7a) HHFKP_23162_cluster-4104_11_30
hsa-miR-6125 ttCCTTCCGaaatac GCGGAAGG m7b (m7b->m6b) HHFKP_23162_cluster-4104_11_30

Mutation Mutation ID Sample Name Cancer Type
chr11:g.16318613G>T COSM1675864 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4476 tCCTTCCTaaatacc CAGGAAGG m7b Created HHFKP_23162_cluster-4104_11_30
hsa-miR-4476 tCCTTCCTaaatacc CAGGAAGG m7b Created HHFKP_23162_cluster-4104_11_30
Mutation Mutation ID Sample Name Cancer Type
chr11:g.16318612A>G COSM1352905 TCGA-AZ-5403-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr11:g.16318612A>C COSM4947578 TCGA-24-1104-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4754 cctTCCGCAatacct AUGCGGAC m6b Created HHFKP_23162_cluster-4104_11_30
hsa-miR-5681b ccttccgCAATACCt AGGUAUUG m7b Created HHFKP_23162_cluster-4104_11_30
hsa-miR-6125 CCTTCCGCaatacct GCGGAAGG m8a Created HHFKP_23162_cluster-4104_11_30
hsa-miR-6850-5p ccTTCCGCAatacct GUGCGGAA m7b (m6b->m7b) HHFKP_23162_cluster-4104_11_30
hsa-miR-4754 cctTCCGCAatacct AUGCGGAC m6b Created HHFKP_23162_cluster-4104_11_30
hsa-miR-5681b ccttccgCAATACCt AGGUAUUG m7b Created HHFKP_23162_cluster-4104_11_30
hsa-miR-6125 CCTTCCGCaatacct GCGGAAGG m8a Created HHFKP_23162_cluster-4104_11_30
hsa-miR-6850-5p ccTTCCGCAatacct GUGCGGAA m7b (m6b->m7b) HHFKP_23162_cluster-4104_11_30

Mutation Mutation ID Sample Name Cancer Type
chr11:g.16318611A>T COSM1352902 TCGA-AY-6386-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4678 cttccgaAATACCTc AAGGUAUU m7b Disrupted HHFKP_23162_cluster-4104_11_30
hsa-miR-5188 ctTCCGATatacctc AAUCGGAC m6b Created HHFKP_23162_cluster-4104_11_30
hsa-miR-4678 cttccgaAATACCTc AAGGUAUU m7b Disrupted HHFKP_23162_cluster-4104_11_30
hsa-miR-5188 ctTCCGATatacctc AAUCGGAC m6b Created HHFKP_23162_cluster-4104_11_30

Mutation Mutation ID Sample Name Cancer Type
chr11:g.16196418C>A COSN4720251 tumor_4107137 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3145-3p ggaAAATATCagcta AGAUAUUU m7b Created HHFCT_24480_cluster-4104_4_193
hsa-miR-4663 ggaaaatCTCAGCTa AGCUGAGC m7a Disrupted HHFCT_24480_cluster-4104_4_193
hsa-miR-5186 ggaaAATCTCagcta AGAGAUUG m6b Disrupted HHFCT_24480_cluster-4104_4_193

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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