SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0078541
Gene Symbol: SOD2
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.159684968G>A COSM207375 TCGA-AA-A01P-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7156-3p gctgacGGCTGCAtc CUGCAGCC m7b Disrupted HHHNA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-miR-7156-3p gctgacGGCTGCAtc CUGCAGCC m7b Disrupted HHHSA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668

Mutation Mutation ID Sample Name Cancer Type
chr6:g.159684961C>T COSM136581 cSCCP6 [skin][scalp][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-105-5p gctGCATTTGttggt UCAAAUGC m7b Created HHHNA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-miR-3065-5p gctgcaTTTGTTGgt UCAACAAA m7b Created HHHNA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-miR-5683 gctgCATCTGTtggt UACAGAUG m7b Disrupted HHHNA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-miR-7-1-3p gctgcATTTGTTGgt CAACAAAU m8a Created HHHNA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-miR-7-2-3p gctgcATTTGTTGgt CAACAAAU m8a Created HHHNA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-miR-7853-5p gctGCATTTGttggt UCAAAUGC m7b Created HHHNA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-miR-105-5p gctGCATTTGttggt UCAAAUGC m7b Created HHHSA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-miR-3065-5p gctgcaTTTGTTGgt UCAACAAA m7b Created HHHSA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-miR-5683 gctgCATCTGTtggt UACAGAUG m7b Disrupted HHHSA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-miR-7-1-3p gctgcATTTGTTGgt CAACAAAU m8a Created HHHSA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-miR-7-2-3p gctgcATTTGTTGgt CAACAAAU m8a Created HHHSA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-miR-7853-5p gctGCATTTGttggt UCAAAUGC m7b Created HHHSA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
Mutation Mutation ID Sample Name Cancer Type
chr6:g.159684956G>T COSM741339 TCGA-37-4135-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.159684951C>A COSM288160 TCGA-AG-3611-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7a-2-3p ttggTGTACAaggct CUGUACAG m6b Created HHHNA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-let-7c-3p ttggTGTACAaggct CUGUACAA m6b Created HHHNA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-let-7g-3p ttggTGTACAaggct CUGUACAG m6b Created HHHNA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-miR-4312 ttggtgtACAAGGCt GGCCUUGU m7b Created HHHNA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-miR-4520-2-3p ttggTGTCCAAggct UUUGGACA m7b Disrupted HHHNA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-let-7a-2-3p ttggTGTACAaggct CUGUACAG m6b Created HHHSA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-let-7c-3p ttggTGTACAaggct CUGUACAA m6b Created HHHSA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-let-7g-3p ttggTGTACAaggct CUGUACAG m6b Created HHHSA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-miR-4312 ttggtgtACAAGGCt GGCCUUGU m7b Created HHHSA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668
hsa-miR-4520-2-3p ttggTGTCCAAggct UUUGGACA m7b Disrupted HHHSA_19793_SOD2|NM_000636|exon_CDS|-6.66978083518055|1.18920217692668

Mutation Mutation ID Sample Name Cancer Type
chr6:g.159684884C>G COSM4409924 LP6007422-DNA_A01 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4520-2-3p tgctTGTCCAAAtca UUUGGACA m8a Disrupted HHKTA_431_NM_000636|618|657|116.693637016589|1.9994013819299
hsa-miR-4520-3p tgctTGTCCAAatca UUGGACAG m7a Disrupted HHKTA_431_NM_000636|618|657|116.693637016589|1.9994013819299
hsa-miR-4529-3p tgcttGTCCAAatca AUUGGACU m6b Disrupted HHKTA_431_NM_000636|618|657|116.693637016589|1.9994013819299
hsa-miR-507 tgcttGTGCAAAtca UUUUGCAC m7b Created HHKTA_431_NM_000636|618|657|116.693637016589|1.9994013819299
hsa-miR-557 tgcttGTGCAAAtca GUUUGCAC m7b Created HHKTA_431_NM_000636|618|657|116.693637016589|1.9994013819299
hsa-miR-7850-5p tgcttGTCCAAAtca GUUUGGAC m7b Disrupted HHKTA_431_NM_000636|618|657|116.693637016589|1.9994013819299
hsa-miR-4520-2-3p tgctTGTCCAAAtca UUUGGACA m8a Disrupted HPKMB_7133_G8175.1_160105927
hsa-miR-4520-3p tgctTGTCCAAatca UUGGACAG m7a Disrupted HPKMB_7133_G8175.1_160105927
hsa-miR-4529-3p tgcttGTCCAAatca AUUGGACU m6b Disrupted HPKMB_7133_G8175.1_160105927
hsa-miR-507 tgcttGTGCAAAtca UUUUGCAC m7b Created HPKMB_7133_G8175.1_160105927
hsa-miR-557 tgcttGTGCAAAtca GUUUGCAC m7b Created HPKMB_7133_G8175.1_160105927
hsa-miR-7850-5p tgcttGTCCAAAtca GUUUGGAC m7b Disrupted HPKMB_7133_G8175.1_160105927
hsa-miR-4520-2-3p tgctTGTCCAAAtca UUUGGACA m8a Disrupted HPKTA_55425_G59877.1_160105928
hsa-miR-4520-3p tgctTGTCCAAatca UUGGACAG m7a Disrupted HPKTA_55425_G59877.1_160105928
hsa-miR-4529-3p tgcttGTCCAAatca AUUGGACU m6b Disrupted HPKTA_55425_G59877.1_160105928
hsa-miR-507 tgcttGTGCAAAtca UUUUGCAC m7b Created HPKTA_55425_G59877.1_160105928
hsa-miR-557 tgcttGTGCAAAtca GUUUGCAC m7b Created HPKTA_55425_G59877.1_160105928
hsa-miR-7850-5p tgcttGTCCAAAtca GUUUGGAC m7b Disrupted HPKTA_55425_G59877.1_160105928
hsa-miR-4520-2-3p tgctTGTCCAAAtca UUUGGACA m8a Disrupted HPRO6_69473_G82875.1_160105903
hsa-miR-4520-3p tgctTGTCCAAatca UUGGACAG m7a Disrupted HPRO6_69473_G82875.1_160105903
hsa-miR-4529-3p tgcttGTCCAAatca AUUGGACU m6b Disrupted HPRO6_69473_G82875.1_160105903
hsa-miR-507 tgcttGTGCAAAtca UUUUGCAC m7b Created HPRO6_69473_G82875.1_160105903
hsa-miR-557 tgcttGTGCAAAtca GUUUGCAC m7b Created HPRO6_69473_G82875.1_160105903
hsa-miR-7850-5p tgcttGTCCAAAtca GUUUGGAC m7b Disrupted HPRO6_69473_G82875.1_160105903
hsa-miR-4520-2-3p tgctTGTCCAAAtca UUUGGACA m8a Disrupted HPSEF_20546_G24794.1_160105927
hsa-miR-4520-3p tgctTGTCCAAatca UUGGACAG m7a Disrupted HPSEF_20546_G24794.1_160105927
hsa-miR-4529-3p tgcttGTCCAAatca AUUGGACU m6b Disrupted HPSEF_20546_G24794.1_160105927
hsa-miR-507 tgcttGTGCAAAtca UUUUGCAC m7b Created HPSEF_20546_G24794.1_160105927
hsa-miR-557 tgcttGTGCAAAtca GUUUGCAC m7b Created HPSEF_20546_G24794.1_160105927
hsa-miR-7850-5p tgcttGTCCAAAtca GUUUGGAC m7b Disrupted HPSEF_20546_G24794.1_160105927
hsa-miR-4520-2-3p tgctTGTCCAAAtca UUUGGACA m8a Disrupted HPTA1_10261_G14634.1_160105928
hsa-miR-4520-3p tgctTGTCCAAatca UUGGACAG m7a Disrupted HPTA1_10261_G14634.1_160105928
hsa-miR-4529-3p tgcttGTCCAAatca AUUGGACU m6b Disrupted HPTA1_10261_G14634.1_160105928
hsa-miR-507 tgcttGTGCAAAtca UUUUGCAC m7b Created HPTA1_10261_G14634.1_160105928
hsa-miR-557 tgcttGTGCAAAtca GUUUGCAC m7b Created HPTA1_10261_G14634.1_160105928
hsa-miR-7850-5p tgcttGTCCAAAtca GUUUGGAC m7b Disrupted HPTA1_10261_G14634.1_160105928

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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