SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_022133
Gene Symbol: SNX16
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.81840021A>G COSN510863
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1208 ggactcAACAGTGtg UCACUGUU m7b Disrupted HPCB1_40276_G51490.1_82752249
hsa-miR-1267 ggacTCAACAGtgtg CCUGUUGA m7b Disrupted HPCB1_40276_G51490.1_82752249
hsa-miR-4663 ggaCTCAGCagtgtg AGCUGAGC m6b Created HPCB1_40276_G51490.1_82752249
hsa-miR-8077 ggACTCAGCagtgtg GGCUGAGU m7b (m6b->m7b) HPCB1_40276_G51490.1_82752249
hsa-miR-8081 gGACTCAAcagtgtg CUUGAGUC m7b Disrupted HPCB1_40276_G51490.1_82752249
hsa-miR-93-3p ggacTCAGCAGTgtg ACUGCUGA m8a Created HPCB1_40276_G51490.1_82752249

Mutation Mutation ID Sample Name Cancer Type
chr8:g.81839977C>T COSM223284 ME009T [skin][trunk][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3173-3p ggcaaCTCCTTatgt AAAGGAGG m6b Disrupted HHRBL_14211_BCBL1-2of3-SCL_8491
hsa-miR-3653-3p ggcaaCTTCTTAtgt CUAAGAAG m7b Created HHRBL_14211_BCBL1-2of3-SCL_8491
hsa-miR-4428 ggcaaCTCCTTatgt CAAGGAGA m6b Disrupted HHRBL_14211_BCBL1-2of3-SCL_8491
hsa-miR-495-5p gGCAACTTCttatgt GAAGUUGC m8a (m7a->m8a) HHRBL_14211_BCBL1-2of3-SCL_8491

Mutation Mutation ID Sample Name Cancer Type
chr8:g.81839970T>C COSM2877117 SNU-175 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1302 ccttaTGTCCCAgtt UUGGGACA m7b Disrupted HHRBL_14211_BCBL1-2of3-SCL_8491
hsa-miR-3945 cctTATGCCCcagtt AGGGCAUA m7b Created HHRBL_14211_BCBL1-2of3-SCL_8491
hsa-miR-4298 ccttaTGTCCCAGtt CUGGGACA m8a Disrupted HHRBL_14211_BCBL1-2of3-SCL_8491
hsa-miR-486-3p ccttaTGCCCCagtt CGGGGCAG m6b Created HHRBL_14211_BCBL1-2of3-SCL_8491

Mutation Mutation ID Sample Name Cancer Type
chr8:g.81839934G>T COSM1102015 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4694-3p gctTCCATTTttaca CAAAUGGA m7b Created HHRBL_14211_BCBL1-2of3-SCL_8491
hsa-miR-548a-3p gcttcCAGTTTTaca CAAAACUG m7b Disrupted HHRBL_14211_BCBL1-2of3-SCL_8491
hsa-miR-548ar-3p gcttcCAGTTTTAca UAAAACUG m8a Disrupted HHRBL_14211_BCBL1-2of3-SCL_8491
hsa-miR-548av-3p gcttcCAGTTTTaca AAAACUGC m7a Disrupted HHRBL_14211_BCBL1-2of3-SCL_8491
hsa-miR-548az-3p gcttcCAGTTTTaca AAAAACUG m7b Disrupted HHRBL_14211_BCBL1-2of3-SCL_8491
hsa-miR-548c-3p gcttccATTTTTaca CAAAAAUC m6b Created HHRBL_14211_BCBL1-2of3-SCL_8491
hsa-miR-548e-3p gcttcCAGTTTTaca AAAAACUG m7b Disrupted HHRBL_14211_BCBL1-2of3-SCL_8491
hsa-miR-548f-3p gcttcCAGTTTTaca AAAAACUG m7b Disrupted HHRBL_14211_BCBL1-2of3-SCL_8491
hsa-miR-548g-3p gcttcCAGTTTTaca AAAACUGU m7a Disrupted HHRBL_14211_BCBL1-2of3-SCL_8491

Mutation Mutation ID Sample Name Cancer Type
chr8:g.81839904C>A COSM1458385 TCGA-A6-3809-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-5p agaagttATTCTTTt CAAAGAAU m7b Created HHRBL_14211_BCBL1-2of3-SCL_8491
hsa-miR-4511 agaAGTTCTTCtttt GAAGAACU m8a Disrupted HHRBL_14211_BCBL1-2of3-SCL_8491
hsa-miR-6507-5p agaagtTATTCTTtt GAAGAAUA m7b Created HHRBL_14211_BCBL1-2of3-SCL_8491

Mutation Mutation ID Sample Name Cancer Type
chr8:g.81839648G>T COSM3901783 TCGA-FP-A4BE-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273d ctatacTGGGTTatg GAACCCAU m6b Disrupted HPRO6_75349_G90221.1_82751887
hsa-miR-3130-5p ctatACTGGGTtatg UACCCAGU m7b Disrupted HPRO6_75349_G90221.1_82751887
hsa-miR-4482-5p ctatACTGGGTTatg AACCCAGU m8a Disrupted HPRO6_75349_G90221.1_82751887

Mutation Mutation ID Sample Name Cancer Type
chr8:g.81839647G>T COSM4628787 Gp2D [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273d tatacTGGGTTatga GAACCCAU m6b Disrupted HPRO6_75349_G90221.1_82751887
hsa-miR-144-3p tATACTGTgttatga UACAGUAU m7b Created HPRO6_75349_G90221.1_82751887
hsa-miR-3130-5p tatACTGGGTtatga UACCCAGU m7b Disrupted HPRO6_75349_G90221.1_82751887
hsa-miR-4482-5p tatACTGGGTTatga AACCCAGU m8a Disrupted HPRO6_75349_G90221.1_82751887

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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