SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0044384
Gene Symbol: SNF8
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr17:g.48933261C>T COSM1750118 B105-0-Tumor [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3646 ccTCATTTagtctgt AAAAUGAA m6b Created HHFKP_60286_uc002ioj.1_3_27
hsa-miR-4494 cctcattCAGTCTGt CCAGACUG m7b Disrupted HHFKP_60286_uc002ioj.1_3_27
hsa-miR-4499 cctcatTCAGTCTgt AAGACUGA m7b Disrupted HHFKP_60286_uc002ioj.1_3_27
hsa-miR-1252-3p cCTCATTTagtctgt CAAAUGAG m7b Created HHFKP_60286_uc002ioj.1_3_27
hsa-miR-3646 ccTCATTTagtctgt AAAAUGAA m6b Created HHFCT_63605_uc002ioj.1_4_38
hsa-miR-4494 cctcattCAGTCTGt CCAGACUG m7b Disrupted HHFCT_63605_uc002ioj.1_4_38
hsa-miR-4499 cctcatTCAGTCTgt AAGACUGA m7b Disrupted HHFCT_63605_uc002ioj.1_4_38

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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