SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_007241
Gene Symbol: SNF8
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.48930587C>T COSM4728682 T3152 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-449b-3p gggttggTGTGGCTg CAGCCACA m7b Created HHFKP_60284_uc002ioj.1_1_16
hsa-miR-5189-3p gGGTTGGCgtggctg UGCCAACC m7b Disrupted HHFKP_60284_uc002ioj.1_1_16

Mutation Mutation ID Sample Name Cancer Type
chr17:g.48930570G>A COSM1630248 RK086_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1227-5p cttacaGGCCCCAgg GUGGGGCC m7b Disrupted HHFCT_63602_uc002ioj.1_1_10
hsa-miR-128-1-5p cttacaGGCCCCagg CGGGGCCG m6b Disrupted HHFCT_63602_uc002ioj.1_1_10
hsa-miR-128-2-5p cttacaGGCCCCagg GGGGGCCG m6b Disrupted HHFCT_63602_uc002ioj.1_1_10
hsa-miR-2861 cttaCAGGCCCCagg GGGGCCUG m8a Disrupted HHFCT_63602_uc002ioj.1_1_10
hsa-miR-3686 cTTACAGAccccagg AUCUGUAA m7b Created HHFCT_63602_uc002ioj.1_1_10
hsa-miR-615-5p cttacaGACCCCagg GGGGGUCC m6b Created HHFCT_63602_uc002ioj.1_1_10
hsa-miR-6735-3p cttACAGGCCccagg AGGCCUGU m7b Disrupted HHFCT_63602_uc002ioj.1_1_10
hsa-miR-6753-3p cttACAGACCccagg UGGUCUGU m7b Created HHFCT_63602_uc002ioj.1_1_10
hsa-miR-6762-5p cttacaGGCCCCagg CGGGGCCA m6b Disrupted HHFCT_63602_uc002ioj.1_1_10
hsa-miR-6845-5p cttacaGGCCCCagg CGGGGCCA m6b Disrupted HHFCT_63602_uc002ioj.1_1_10
hsa-miR-7107-3p cttACAGACCccagg UGGUCUGU m7b Created HHFCT_63602_uc002ioj.1_1_10
hsa-miR-7155-5p cttacagACCCCAGg UCUGGGGU m7b Created HHFCT_63602_uc002ioj.1_1_10
hsa-miR-7704 cttacaGACCCCagg CGGGGUCG m6b Created HHFCT_63602_uc002ioj.1_1_10
hsa-miR-1227-5p cttacaGGCCCCAgg GUGGGGCC m7b Disrupted HHFKP_60284_uc002ioj.1_1_16
hsa-miR-128-1-5p cttacaGGCCCCagg CGGGGCCG m6b Disrupted HHFKP_60284_uc002ioj.1_1_16
hsa-miR-128-2-5p cttacaGGCCCCagg GGGGGCCG m6b Disrupted HHFKP_60284_uc002ioj.1_1_16
hsa-miR-2861 cttaCAGGCCCCagg GGGGCCUG m8a Disrupted HHFKP_60284_uc002ioj.1_1_16
hsa-miR-3686 cTTACAGAccccagg AUCUGUAA m7b Created HHFKP_60284_uc002ioj.1_1_16
hsa-miR-615-5p cttacaGACCCCagg GGGGGUCC m6b Created HHFKP_60284_uc002ioj.1_1_16
hsa-miR-6735-3p cttACAGGCCccagg AGGCCUGU m7b Disrupted HHFKP_60284_uc002ioj.1_1_16
hsa-miR-6753-3p cttACAGACCccagg UGGUCUGU m7b Created HHFKP_60284_uc002ioj.1_1_16
hsa-miR-6762-5p cttacaGGCCCCagg CGGGGCCA m6b Disrupted HHFKP_60284_uc002ioj.1_1_16
hsa-miR-6845-5p cttacaGGCCCCagg CGGGGCCA m6b Disrupted HHFKP_60284_uc002ioj.1_1_16
hsa-miR-7107-3p cttACAGACCccagg UGGUCUGU m7b Created HHFKP_60284_uc002ioj.1_1_16
hsa-miR-7155-5p cttacagACCCCAGg UCUGGGGU m7b Created HHFKP_60284_uc002ioj.1_1_16
hsa-miR-7704 cttacaGACCCCagg CGGGGUCG m6b Created HHFKP_60284_uc002ioj.1_1_16
hsa-miR-1227-5p cttacaGGCCCCAgg GUGGGGCC m7b Disrupted HHRBL_6471_BCBL1-2of3-SCL_10547
hsa-miR-128-1-5p cttacaGGCCCCagg CGGGGCCG m6b Disrupted HHRBL_6471_BCBL1-2of3-SCL_10547
hsa-miR-128-2-5p cttacaGGCCCCagg GGGGGCCG m6b Disrupted HHRBL_6471_BCBL1-2of3-SCL_10547
hsa-miR-2861 cttaCAGGCCCCagg GGGGCCUG m8a Disrupted HHRBL_6471_BCBL1-2of3-SCL_10547
hsa-miR-3686 cTTACAGAccccagg AUCUGUAA m7b Created HHRBL_6471_BCBL1-2of3-SCL_10547
hsa-miR-615-5p cttacaGACCCCagg GGGGGUCC m6b Created HHRBL_6471_BCBL1-2of3-SCL_10547
hsa-miR-6735-3p cttACAGGCCccagg AGGCCUGU m7b Disrupted HHRBL_6471_BCBL1-2of3-SCL_10547
hsa-miR-6753-3p cttACAGACCccagg UGGUCUGU m7b Created HHRBL_6471_BCBL1-2of3-SCL_10547
hsa-miR-6762-5p cttacaGGCCCCagg CGGGGCCA m6b Disrupted HHRBL_6471_BCBL1-2of3-SCL_10547
hsa-miR-6845-5p cttacaGGCCCCagg CGGGGCCA m6b Disrupted HHRBL_6471_BCBL1-2of3-SCL_10547
hsa-miR-7107-3p cttACAGACCccagg UGGUCUGU m7b Created HHRBL_6471_BCBL1-2of3-SCL_10547
hsa-miR-7155-5p cttacagACCCCAGg UCUGGGGU m7b Created HHRBL_6471_BCBL1-2of3-SCL_10547
hsa-miR-7704 cttacaGACCCCagg CGGGGUCG m6b Created HHRBL_6471_BCBL1-2of3-SCL_10547

Mutation Mutation ID Sample Name Cancer Type
chr17:g.48930549T>C COSM1521809 TCGA-86-7953-01 [lung][left_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-199a-3p ccACTACTGgctgcc ACAGUAGU m7b (m7b->m6b) HHRBL_6471_BCBL1-2of3-SCL_10547
hsa-miR-199b-3p ccACTACTGgctgcc ACAGUAGU m7b (m7b->m6b) HHRBL_6471_BCBL1-2of3-SCL_10547
hsa-miR-3129-5p ccACTACTGgctgcc GCAGUAGU m7b (m7b->m6b) HHRBL_6471_BCBL1-2of3-SCL_10547
hsa-miR-4676-5p ccactACTGGCTgcc GAGCCAGU m7b Disrupted HHRBL_6471_BCBL1-2of3-SCL_10547
hsa-miR-575 ccactACTGGCTgcc GAGCCAGU m7b Disrupted HHRBL_6471_BCBL1-2of3-SCL_10547

Mutation Mutation ID Sample Name Cancer Type
chr17:g.48930510A>C COSM1630247 RK086_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-216b-5p ccagGAGATTacagc AAAUCUCU m6b Disrupted HHRBL_6471_BCBL1-2of3-SCL_10547
hsa-miR-6796-3p ccagGAGCTTacagc GAAGCUCU m6b Created HHRBL_6471_BCBL1-2of3-SCL_10547
hsa-miR-99a-3p ccagGAGCTTacagc CAAGCUCG m6b Created HHRBL_6471_BCBL1-2of3-SCL_10547
hsa-miR-99b-3p ccagGAGCTTacagc CAAGCUCG m6b Created HHRBL_6471_BCBL1-2of3-SCL_10547

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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