SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0062873
Gene Symbol: SMTN
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr22:g.31091412C>T COSM1033356 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1285-5p tcaccatTGAGATCa GAUCUCAC m7a Created HPRO6_51464_G60996.1_31487397
hsa-miR-4695-3p tcaccatTGAGATCa UGAUCUCA m7b Created HPRO6_51464_G60996.1_31487397
hsa-miR-1285-5p tcaccatTGAGATCa GAUCUCAC m7a Created HPRO6_51464_G60996.1_31487397
hsa-miR-4695-3p tcaccatTGAGATCa UGAUCUCA m7b Created HPRO6_51464_G60996.1_31487397
hsa-miR-1285-5p tcaccatTGAGATCa GAUCUCAC m7a Created HPRO6_51464_G60996.1_31487397
hsa-miR-4695-3p tcaccatTGAGATCa UGAUCUCA m7b Created HPRO6_51464_G60996.1_31487397

Mutation Mutation ID Sample Name Cancer Type
chr22:g.31091039C>G COSM4936224 TCGA-BC-A10Z-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3607-5p tTCACATGtgattct GCAUGUGA m7b Created HHKTA_51921_NM_134269|1227|1266|1.29803823155271|0.393971793804137
hsa-miR-4717-3p ttcaCATGTGattct ACACAUGG m6b Created HHKTA_51921_NM_134269|1227|1266|1.29803823155271|0.393971793804137
hsa-miR-576-3p ttCACATCTgattct AAGAUGUG m7b (m7b->m6b) HHKTA_51921_NM_134269|1227|1266|1.29803823155271|0.393971793804137
hsa-miR-3607-5p tTCACATGtgattct GCAUGUGA m7b Created HHKTA_51921_NM_134269|1227|1266|1.29803823155271|0.393971793804137
hsa-miR-4717-3p ttcaCATGTGattct ACACAUGG m6b Created HHKTA_51921_NM_134269|1227|1266|1.29803823155271|0.393971793804137
hsa-miR-576-3p ttCACATCTgattct AAGAUGUG m7b (m7b->m6b) HHKTA_51921_NM_134269|1227|1266|1.29803823155271|0.393971793804137
hsa-miR-3607-5p tTCACATGtgattct GCAUGUGA m7b Created HHKTA_51921_NM_134269|1227|1266|1.29803823155271|0.393971793804137
hsa-miR-4717-3p ttcaCATGTGattct ACACAUGG m6b Created HHKTA_51921_NM_134269|1227|1266|1.29803823155271|0.393971793804137
hsa-miR-576-3p ttCACATCTgattct AAGAUGUG m7b (m7b->m6b) HHKTA_51921_NM_134269|1227|1266|1.29803823155271|0.393971793804137

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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