SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_134269
Gene Symbol: SMTN
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr22:g.31104550G>A COSN6692630 CHC433T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-885-3p gcccacCGCTGCCct AGGCAGCG m7b Disrupted HHFCT_101505_cluster-15270_1_1734
hsa-miR-6786-5p gCCCACCGCtgccct GCGGUGGG m8a (m8a->m7a) HHFCT_101505_cluster-15270_1_1734
hsa-miR-654-5p GCCCACCActgccct UGGUGGGC m8a Created HHFCT_101505_cluster-15270_1_1734
hsa-miR-541-3p GCCCACCActgccct UGGUGGGC m8a Created HHFCT_101505_cluster-15270_1_1734
hsa-miR-449b-5p gcccacCACTGCCct AGGCAGUG m7b Created HHFCT_101505_cluster-15270_1_1734
hsa-miR-449a gcccacCACTGCCct UGGCAGUG m7b Created HHFCT_101505_cluster-15270_1_1734
hsa-miR-34c-5p gcccacCACTGCCct AGGCAGUG m7b Created HHFCT_101505_cluster-15270_1_1734
hsa-miR-34a-5p gcccacCACTGCCct UGGCAGUG m7b Created HHFCT_101505_cluster-15270_1_1734

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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