SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0087794
Gene Symbol: SMC2
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.104098504G>C COSM3929705 TCGA-DU-5849-01 [central_nervous_system][brain][glioma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3664-5p aacacCAGAGTacag AACUCUGU m6b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-4299 aaCACCAGagtacag GCUGGUGA m6b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-4318 aacaCCACAGTacag CACUGUGG m7b Created HPSEF_22957_G27790.1_106860777
hsa-miR-4456 aaCACCAGagtacag CCUGGUGG m6b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-4693-5p aacacCACAGTAcag AUACUGUG m7b Created HPSEF_22957_G27790.1_106860777
hsa-miR-4714-5p aacacCAGAGTacag AACUCUGA m6b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-514a-5p aacaCCAGAGTAcag UACUCUGG m8a Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-548q aaCACCAGagtacag GCUGGUGC m6b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-6764-3p aacACCAGAGtacag UCUCUGGU m7b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-6824-3p aacACCAGAGtacag UCUCUGGU m7b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-7978 aACACCAGAgtacag UCUGGUGU m8a (m8a->m7a) HPSEF_22957_G27790.1_106860777
hsa-miR-892a aacacCACAGTacag CACUGUGU m6b Created HPSEF_22957_G27790.1_106860777
hsa-miR-3664-5p aacacCAGAGTacag AACUCUGU m6b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-4299 aaCACCAGagtacag GCUGGUGA m6b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-4318 aacaCCACAGTacag CACUGUGG m7b Created HPSEF_22957_G27790.1_106860777
hsa-miR-4456 aaCACCAGagtacag CCUGGUGG m6b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-4693-5p aacacCACAGTAcag AUACUGUG m7b Created HPSEF_22957_G27790.1_106860777
hsa-miR-4714-5p aacacCAGAGTacag AACUCUGA m6b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-514a-5p aacaCCAGAGTAcag UACUCUGG m8a Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-548q aaCACCAGagtacag GCUGGUGC m6b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-6764-3p aacACCAGAGtacag UCUCUGGU m7b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-6824-3p aacACCAGAGtacag UCUCUGGU m7b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-7978 aACACCAGAgtacag UCUGGUGU m8a (m8a->m7a) HPSEF_22957_G27790.1_106860777
hsa-miR-892a aacacCACAGTacag CACUGUGU m6b Created HPSEF_22957_G27790.1_106860777
hsa-miR-3664-5p aacacCAGAGTacag AACUCUGU m6b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-4299 aaCACCAGagtacag GCUGGUGA m6b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-4318 aacaCCACAGTacag CACUGUGG m7b Created HPSEF_22957_G27790.1_106860777
hsa-miR-4456 aaCACCAGagtacag CCUGGUGG m6b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-4693-5p aacacCACAGTAcag AUACUGUG m7b Created HPSEF_22957_G27790.1_106860777
hsa-miR-4714-5p aacacCAGAGTacag AACUCUGA m6b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-514a-5p aacaCCAGAGTAcag UACUCUGG m8a Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-548q aaCACCAGagtacag GCUGGUGC m6b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-6764-3p aacACCAGAGtacag UCUCUGGU m7b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-6824-3p aacACCAGAGtacag UCUCUGGU m7b Disrupted HPSEF_22957_G27790.1_106860777
hsa-miR-7978 aACACCAGAgtacag UCUGGUGU m8a (m8a->m7a) HPSEF_22957_G27790.1_106860777
hsa-miR-892a aacacCACAGTacag CACUGUGU m6b Created HPSEF_22957_G27790.1_106860777

Mutation Mutation ID Sample Name Cancer Type
chr9:g.104098485G>A COSM4171826 2_tFL [haematopoietic_and_lymphoid_tissue][lymph_node][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-136-5p cAATGGAGTcaatgc ACUCCAUU m8a (m8a->m7a) HPRO6_76562_G91776.1_106860771
hsa-miR-145-3p caatGGAATCaatgc GGAUUCCU m6b Created HPRO6_76562_G91776.1_106860771
hsa-miR-136-5p cAATGGAGTcaatgc ACUCCAUU m8a (m8a->m7a) HPSEF_22957_G27790.1_106860777
hsa-miR-145-3p caatGGAATCaatgc GGAUUCCU m6b Created HPSEF_22957_G27790.1_106860777
hsa-miR-136-5p cAATGGAGTcaatgc ACUCCAUU m8a (m8a->m7a) HPRO6_76562_G91776.1_106860771
hsa-miR-145-3p caatGGAATCaatgc GGAUUCCU m6b Created HPRO6_76562_G91776.1_106860771
hsa-miR-136-5p cAATGGAGTcaatgc ACUCCAUU m8a (m8a->m7a) HPSEF_22957_G27790.1_106860777
hsa-miR-145-3p caatGGAATCaatgc GGAUUCCU m6b Created HPSEF_22957_G27790.1_106860777
hsa-miR-136-5p cAATGGAGTcaatgc ACUCCAUU m8a (m8a->m7a) HPRO6_76562_G91776.1_106860771
hsa-miR-145-3p caatGGAATCaatgc GGAUUCCU m6b Created HPRO6_76562_G91776.1_106860771
hsa-miR-136-5p cAATGGAGTcaatgc ACUCCAUU m8a (m8a->m7a) HPSEF_22957_G27790.1_106860777
hsa-miR-145-3p caatGGAATCaatgc GGAUUCCU m6b Created HPSEF_22957_G27790.1_106860777

Mutation Mutation ID Sample Name Cancer Type
chr9:g.104098484A>G COSM486849 TCGA-B8-4151-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-136-5p tcAATGGAGTcaatg ACUCCAUU m8a Disrupted HPRO6_76562_G91776.1_106860771
hsa-miR-6846-3p tcaatGGGGTCAatg UGACCCCU m7a Created HPRO6_76562_G91776.1_106860771
hsa-miR-6859-3p tcaatGGGGTCAatg UGACCCCC m7a Created HPRO6_76562_G91776.1_106860771
hsa-miR-136-5p tcAATGGAGTcaatg ACUCCAUU m8a Disrupted HPTK1_29565_G35469.1_106860765
hsa-miR-6846-3p tcaatGGGGTCAatg UGACCCCU m7a Created HPTK1_29565_G35469.1_106860765
hsa-miR-6859-3p tcaatGGGGTCAatg UGACCCCC m7a Created HPTK1_29565_G35469.1_106860765
hsa-miR-136-5p tcAATGGAGTcaatg ACUCCAUU m8a Disrupted HPRO6_76562_G91776.1_106860771
hsa-miR-6846-3p tcaatGGGGTCAatg UGACCCCU m7a Created HPRO6_76562_G91776.1_106860771
hsa-miR-6859-3p tcaatGGGGTCAatg UGACCCCC m7a Created HPRO6_76562_G91776.1_106860771
hsa-miR-136-5p tcAATGGAGTcaatg ACUCCAUU m8a Disrupted HPTK1_29565_G35469.1_106860765
hsa-miR-6846-3p tcaatGGGGTCAatg UGACCCCU m7a Created HPTK1_29565_G35469.1_106860765
hsa-miR-6859-3p tcaatGGGGTCAatg UGACCCCC m7a Created HPTK1_29565_G35469.1_106860765

Mutation Mutation ID Sample Name Cancer Type
chr9:g.104096254C>T COSM1723717 3_PRE-TREATMENT [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4509 caaagtCCTTTAGga ACUAAAGG m7b Disrupted HHKTA_26183_NM_001042550|625|664|2.85568410941597|0.522927693686335
hsa-miR-548u caaAGTCTTTtagga CAAAGACU m7b Created HHKTA_26183_NM_001042550|625|664|2.85568410941597|0.522927693686335
hsa-miR-7161-5p caaAGTCTTTtagga UAAAGACU m7b Created HHKTA_26183_NM_001042550|625|664|2.85568410941597|0.522927693686335
hsa-miR-8083 caAAGTCCTttagga CAGGACUU m7b (m7b->m6b) HHKTA_26183_NM_001042550|625|664|2.85568410941597|0.522927693686335
hsa-miR-8087 caAAGTCTTttagga GAAGACUU m7b (m6b->m7b) HHKTA_26183_NM_001042550|625|664|2.85568410941597|0.522927693686335
hsa-miR-4509 caaagtCCTTTAGga ACUAAAGG m7b Disrupted HHKTA_26183_NM_001042550|625|664|2.85568410941597|0.522927693686335
hsa-miR-548u caaAGTCTTTtagga CAAAGACU m7b Created HHKTA_26183_NM_001042550|625|664|2.85568410941597|0.522927693686335
hsa-miR-7161-5p caaAGTCTTTtagga UAAAGACU m7b Created HHKTA_26183_NM_001042550|625|664|2.85568410941597|0.522927693686335
hsa-miR-8083 caAAGTCCTttagga CAGGACUU m7b (m7b->m6b) HHKTA_26183_NM_001042550|625|664|2.85568410941597|0.522927693686335
hsa-miR-8087 caAAGTCTTttagga GAAGACUU m7b (m6b->m7b) HHKTA_26183_NM_001042550|625|664|2.85568410941597|0.522927693686335

Mutation Mutation ID Sample Name Cancer Type
chr9:g.104096187G>A COSM4382817 707T [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-153-5p cAAAAATGggcaggc UCAUUUUU m7b Disrupted HHFKP_149360_cluster-22902_3_44
hsa-miR-6747-3p caaaaatAGGCAGGc UCCUGCCU m7b Created HHFKP_149360_cluster-22902_3_44
hsa-miR-153-5p cAAAAATGggcaggc UCAUUUUU m7b Disrupted HHFKP_149360_cluster-22902_3_44
hsa-miR-6747-3p caaaaatAGGCAGGc UCCUGCCU m7b Created HHFKP_149360_cluster-22902_3_44
hsa-miR-153-5p cAAAAATGggcaggc UCAUUUUU m7b Disrupted HHFKP_149360_cluster-22902_3_44
hsa-miR-6747-3p caaaaatAGGCAGGc UCCUGCCU m7b Created HHFKP_149360_cluster-22902_3_44

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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