SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001190821
Gene Symbol: SMAD7
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr18:g.48949880C>G COSM3796433 TCGA-K4-A3WU-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181a-5p tgTGAATGTTacggg AACAUUCA m8a Created HPSEF_10828_G12977.1_46476260
hsa-miR-181b-5p tgTGAATGTTacggg AACAUUCA m8a Created HPSEF_10828_G12977.1_46476260
hsa-miR-181c-5p tgTGAATGTTacggg AACAUUCA m8a Created HPSEF_10828_G12977.1_46476260
hsa-miR-181d-5p tgTGAATGTTacggg AACAUUCA m8a Created HPSEF_10828_G12977.1_46476260
hsa-miR-3143 tgtgAATGTTAcggg AUAACAUU m7b Created HPSEF_10828_G12977.1_46476260
hsa-miR-4262 tgTGAATGTtacggg GACAUUCA m7b (m6b->m7b) HPSEF_10828_G12977.1_46476260
hsa-miR-543 tgtGAATGTTacggg AAACAUUC m7b Created HPSEF_10828_G12977.1_46476260

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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