SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_020342
Gene Symbol: SLC39A10
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr2:g.195657736C>G COSN15118572 LP6005690-DNA_C02 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4643 tggggATGTGTaggc GACACAUG m6b Created HHFCT_91681_cluster-13295_6_17
hsa-miR-466 tggggATGTGTAggc AUACACAU m7b Created HHFCT_91681_cluster-13295_6_17
hsa-miR-4789-3p tggggATGTGTaggc CACACAUA m6b Created HHFCT_91681_cluster-13295_6_17
hsa-miR-6729-3p tGGGGATGtgtaggc UCAUCCCC m7b Created HHFCT_91681_cluster-13295_6_17

Mutation Mutation ID Sample Name Cancer Type
chr2:g.195657538G>A COSN7155744 8048309 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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