SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0072496
Gene Symbol: SLC38A9
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.55635577T>C COSM449775 TCGA-BH-A0HY-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1252-5p catTTCCTTCaccac AGAAGGAA m7b Disrupted HHFCT_122594_cluster-18579_14_16
hsa-miR-4316 catttcCCTCACCac GGUGAGGC m7a Created HHFCT_122594_cluster-18579_14_16
hsa-miR-4710 catttcCCTCACCac GGGUGAGG m7b Created HHFCT_122594_cluster-18579_14_16
hsa-miR-4792 catttccCTCACCac CGGUGAGC m6b Created HHFCT_122594_cluster-18579_14_16
hsa-miR-5093 CATTTCCTtcaccac AGGAAAUG m8a Disrupted HHFCT_122594_cluster-18579_14_16
hsa-miR-5584-5p caTTTCCCTcaccac CAGGGAAA m7b (m6b->m7b) HHFCT_122594_cluster-18579_14_16
hsa-miR-651-3p caTTTCCTTcaccac AAAGGAAA m7b (m7b->m6b) HHFCT_122594_cluster-18579_14_16
hsa-miR-6834-5p cattTCCCTCACcac GUGAGGGA m8a Created HHFCT_122594_cluster-18579_14_16
hsa-miR-7855-5p catttccCTCACCAc UUGGUGAG m7b Created HHFCT_122594_cluster-18579_14_16

Mutation Mutation ID Sample Name Cancer Type
chr5:g.55633885C>T COSM738495 TCGA-18-3409-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-382-5p ACAACTTCcctagca GAAGUUGU m8a Disrupted HHFCT_122593_cluster-18579_13_12
hsa-miR-4496 acaacTTTCCTagca GAGGAAAC m6b Created HHFCT_122593_cluster-18579_13_12
hsa-miR-4747-5p acaaCTTCCCTagca AGGGAAGG m7a Disrupted HHFCT_122593_cluster-18579_13_12
hsa-miR-5196-5p acaaCTTCCCTagca AGGGAAGG m7a Disrupted HHFCT_122593_cluster-18579_13_12
hsa-miR-5584-5p acaacTTCCCTagca CAGGGAAA m6b Disrupted HHFCT_122593_cluster-18579_13_12
hsa-miR-6750-5p acaacTTCCCTagca CAGGGAAC m6b Disrupted HHFCT_122593_cluster-18579_13_12
hsa-miR-6822-5p acaacTTCCCTagca CAGGGAAC m6b Disrupted HHFCT_122593_cluster-18579_13_12
hsa-miR-9500 acaaCTTCCCTagca AAGGGAAG m7b Disrupted HHFCT_122593_cluster-18579_13_12

Mutation Mutation ID Sample Name Cancer Type
chr5:g.55633870C>T COSM1068933 TCGA-D1-A103-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4797-5p gtgacACTCTGTCct GACAGAGU m8a Created HHFCT_122593_cluster-18579_13_12
hsa-miR-759 gtgaCACTCTGtcct GCAGAGUG m7b Created HHFCT_122593_cluster-18579_13_12

Mutation Mutation ID Sample Name Cancer Type
chr5:g.55633859CAT>T COSM1683164 SF268 [central_nervous_system][brain][glioma][astrocytoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-3p tgtccttCATTGCAagg CUGCAAUG m7b Disrupted HHFCT_122593_cluster-18579_13_12
hsa-miR-548aj-5p tgtcCTTTTGCAagg UGCAAAAG m8a Created HHFCT_122593_cluster-18579_13_12
hsa-miR-548aw tgtccTTTTGCAagg GUGCAAAA m7b Created HHFCT_122593_cluster-18579_13_12
hsa-miR-548f-5p tgtcCTTTTGCAagg UGCAAAAG m8a Created HHFCT_122593_cluster-18579_13_12
hsa-miR-548g-5p tgtcCTTTTGCAagg UGCAAAAG m8a Created HHFCT_122593_cluster-18579_13_12
hsa-miR-548x-5p tgtcCTTTTGCAagg UGCAAAAG m8a Created HHFCT_122593_cluster-18579_13_12

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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