SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_016612
Gene Symbol: SLC25A37
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.23571827G>A COSM1196129 H1155 [lung][NS][carcinoma][large_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-138-5p accaagCACCAGCTg AGCUGGUG m8a Created HPCB3_22599_G31005.1_23429341
hsa-miR-3907 accaAGCACCagctg AGGUGCUC m6b Created HPCB3_22599_G31005.1_23429341
hsa-miR-548q accaaGCACCAGCtg GCUGGUGC m8a Created HPCB3_22599_G31005.1_23429341
hsa-miR-636 acCAAGCACcagctg UGUGCUUG m7b (m6b->m7b) HPCB3_22599_G31005.1_23429341

Mutation Mutation ID Sample Name Cancer Type
chr8:g.23571816T>C COSM4162928 PTC-10C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3915 agtacTTCCTCAcca UUGAGGAA m7b Created HPCB3_22599_G31005.1_23429341
hsa-miR-3928-3p agtacTTCCTCacca GGAGGAAC m6b Created HPCB3_22599_G31005.1_23429341
hsa-miR-4316 agtacttCCTCACCa GGUGAGGC m7a Created HPCB3_22599_G31005.1_23429341
hsa-miR-4710 agtacttCCTCACCa GGGUGAGG m7b Created HPCB3_22599_G31005.1_23429341
hsa-miR-539-5p agtacTTTCTCacca GGAGAAAU m6b Disrupted HPCB3_22599_G31005.1_23429341
hsa-miR-8054 aGTACTTTCtcacca GAAAGUAC m8a (m8a->m7a) HPCB3_22599_G31005.1_23429341

Mutation Mutation ID Sample Name Cancer Type
chr8:g.23571493T>C COSM604861 TCGA-73-4675-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1262 caTCACCCATgagtt AUGGGUGA m8a Created HPKTA_58650_G63404.1_23429002
hsa-miR-4701-3p caTCACCCATgagtt AUGGGUGA m8a Created HPKTA_58650_G63404.1_23429002
hsa-miR-6736-5p caTCACCCAtgagtt CUGGGUGA m7b (m6b->m7b) HPKTA_58650_G63404.1_23429002
hsa-miR-6800-5p caTCACCTAtgagtt GUAGGUGA m7b (m7b->m6b) HPKTA_58650_G63404.1_23429002

Mutation Mutation ID Sample Name Cancer Type
chr8:g.23571477C>T COSM4902490 TCGA-GF-A6C9-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1193 tccagtCCATCCact GGGAUGGU m6b Disrupted HPKTA_58650_G63404.1_23429002
hsa-miR-1269a tcCAGTCCAtccact CUGGACUG m7b (m7b->m6b) HPKTA_58650_G63404.1_23429002
hsa-miR-1269b tcCAGTCCAtccact CUGGACUG m7b (m7b->m6b) HPKTA_58650_G63404.1_23429002
hsa-miR-151a-3p tcCAGTCTAtccact CUAGACUG m7b (m6b->m7b) HPKTA_58650_G63404.1_23429002
hsa-miR-3691-5p tccagtcCATCCACt AGUGGAUG m7b Disrupted HPKTA_58650_G63404.1_23429002
hsa-miR-376b-5p tccagtcTATCCACt CGUGGAUA m7b Created HPKTA_58650_G63404.1_23429002
hsa-miR-376c-5p tccagtcTATCCACt GGUGGAUA m7b Created HPKTA_58650_G63404.1_23429002
hsa-miR-432-3p tccagtCCATCCAct CUGGAUGG m7b Disrupted HPKTA_58650_G63404.1_23429002
hsa-miR-4463 tCCAGTCTatccact GAGACUGG m7b Created HPKTA_58650_G63404.1_23429002
hsa-miR-4499 tcCAGTCTatccact AAGACUGA m6b Created HPKTA_58650_G63404.1_23429002
hsa-miR-4534 tccagTCCATCCact GGAUGGAG m7a Disrupted HPKTA_58650_G63404.1_23429002
hsa-miR-5191 tccagtCTATCCact AGGAUAGG m6b Created HPKTA_58650_G63404.1_23429002

Mutation Mutation ID Sample Name Cancer Type
chr8:g.23571446C>T COSM2786726 TCGA-EE-A3JI-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4520-5p tacacCACGCAGctg CCUGCGUG m7b Disrupted HHKTA_31416_NM_016612|723|762|2.33646881679488|0.565185073456806
hsa-miR-5011-3p tacaCCATGCAgctg GUGCAUGG m7b Created HHKTA_31416_NM_016612|723|762|2.33646881679488|0.565185073456806
hsa-miR-6821-5p tacaCCACGCAgctg GUGCGUGG m7b Disrupted HHKTA_31416_NM_016612|723|762|2.33646881679488|0.565185073456806
hsa-miR-6853-5p tacaCCACGCagctg AGCGUGGG m6b Disrupted HHKTA_31416_NM_016612|723|762|2.33646881679488|0.565185073456806

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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