SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0078610
Gene Symbol: SLC22A3
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.160398038C>T COSM3023729 SNU-283 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4786-3p tgaacctTGGCTTCc UGAAGCCA m7b Created HHFCT_140835_uc003qti.1_67_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.160398026C>T COSM1265763 ESO-864 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2392 cccaagCCATCCTga UAGGAUGG m7b Disrupted HHFKP_129095_uc003qti.1_22_8
hsa-miR-135b-5p cccAAGCCATcctga UAUGGCUU m7b Disrupted HHFKP_129095_uc003qti.1_22_8
hsa-miR-135a-5p cccAAGCCATcctga UAUGGCUU m7b Disrupted HHFKP_129095_uc003qti.1_22_8
hsa-miR-1265 cccaagcCATCCTGa CAGGAUGU m7a Disrupted HHFKP_129095_uc003qti.1_22_8
hsa-miR-4538 cCCAAGCTatcctga GAGCUUGG m7b Created HHFKP_129095_uc003qti.1_22_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.160398001C>T COSM1441983 T3724 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5092 gtcaatgCGTGGATg AAUCCACG m7b Disrupted HHFKP_129095_uc003qti.1_22_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.160397996C>G COSM1545428 TCGA-78-7539-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-377-3p tcTGTGTGAatgcgt AUCACACA m7b (m6b->m7b) HHFKP_129095_uc003qti.1_22_8
hsa-miR-6768-5p tCTGTGTGaatgcgt CACACAGG m7a Created HHFKP_129095_uc003qti.1_22_8
hsa-miR-514b-3p tctGTGTCAATgcgt AUUGACAC m8a Disrupted HHFKP_129095_uc003qti.1_22_8
hsa-miR-514a-3p tctGTGTCAATgcgt AUUGACAC m8a Disrupted HHFKP_129095_uc003qti.1_22_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.160397991T>C COSM1226057 587342 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4462 ccttgtCCGTGTCAa UGACACGG m8a Created HHFKP_129095_uc003qti.1_22_8
hsa-miR-602 ccttgtCCGTGTCaa GACACGGG m7a Created HHFKP_129095_uc003qti.1_22_8
hsa-miR-642a-3p ccttgtcTGTGTCaa AGACACAU m6b Disrupted HHFKP_129095_uc003qti.1_22_8
hsa-miR-642b-3p ccttgtcTGTGTCaa AGACACAU m6b Disrupted HHFKP_129095_uc003qti.1_22_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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