SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_021977
Gene Symbol: SLC22A3
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.160451052T>A COSM1441989 TCGA-AY-6386-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548m tctcACCTTTGaggc CAAAGGUA m7a Disrupted HHFCT_140863_uc003qti.1_95_9

Mutation Mutation ID Sample Name Cancer Type
chr6:g.160451051C>T COSM76452 TCGA-13-1507-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3609 ctcTCACTTTtgagg CAAAGUGA m7b Created HHFCT_140863_uc003qti.1_95_9
hsa-miR-371b-5p ctctcacTTTTGAGg ACUCAAAA m7b Created HHFCT_140863_uc003qti.1_95_9
hsa-miR-373-5p ctctcacTTTTGAGg ACUCAAAA m7b Created HHFCT_140863_uc003qti.1_95_9
hsa-miR-548ah-5p ctcTCACTTTTgagg AAAAGUGA m8a Created HHFCT_140863_uc003qti.1_95_9
hsa-miR-548az-5p ctctCACTTTTGagg CAAAAGUG m8a Created HHFCT_140863_uc003qti.1_95_9
hsa-miR-548m ctctcACCTTTGagg CAAAGGUA m7a Disrupted HHFCT_140863_uc003qti.1_95_9
hsa-miR-548n ctctcACTTTTGagg CAAAAGUA m7a Created HHFCT_140863_uc003qti.1_95_9
hsa-miR-548t-5p ctctCACTTTTGagg CAAAAGUG m8a Created HHFCT_140863_uc003qti.1_95_9
hsa-miR-616-5p ctctcacTTTTGAGg ACUCAAAA m7b Created HHFCT_140863_uc003qti.1_95_9

Mutation Mutation ID Sample Name Cancer Type
chr6:g.160451043G>A COSM207443 TCGA-AA-3877-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4481 gtttCCCACTCtcac GGAGUGGG m7b Created HHFCT_140863_uc003qti.1_95_9
hsa-miR-4693-3p gtttccCACTCTCAc UGAGAGUG m8a Created HHFCT_140863_uc003qti.1_95_9
hsa-miR-4745-5p gtttCCCACTCtcac UGAGUGGG m7b Created HHFCT_140863_uc003qti.1_95_9

Mutation Mutation ID Sample Name Cancer Type
chr6:g.160451040C>T COSM1698252 YURTHE [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4738-3p cCAGTTTCccgctct UGAAACUG m7b Disrupted HHFCT_140863_uc003qti.1_95_9
hsa-miR-548a-3p cCAGTTTTccgctct CAAAACUG m7b Created HHFCT_140863_uc003qti.1_95_9
hsa-miR-548ar-3p cCAGTTTTccgctct UAAAACUG m7b Created HHFCT_140863_uc003qti.1_95_9
hsa-miR-548az-3p cCAGTTTTccgctct AAAAACUG m7b Created HHFCT_140863_uc003qti.1_95_9
hsa-miR-548e-3p cCAGTTTTccgctct AAAAACUG m7b Created HHFCT_140863_uc003qti.1_95_9
hsa-miR-548f-3p cCAGTTTTccgctct AAAAACUG m7b Created HHFCT_140863_uc003qti.1_95_9

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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