SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0062022
Gene Symbol: SLC19A1
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr21:g.45530401C>T COSN9160414 AOCS-155-3-5 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-142-3p ctcACACTACAcaca UGUAGUGU m8a Created HHFCT_98199_cluster-15127_21_13
hsa-miR-147a ctcacaCCACACACa GUGUGUGG m8a Disrupted HHFCT_98199_cluster-15127_21_13
hsa-miR-3650 ctCACACCacacaca AGGUGUGU m6b Disrupted HHFCT_98199_cluster-15127_21_13
hsa-miR-6073 ctcaCACTACacaca GGUAGUGA m6b Created HHFCT_98199_cluster-15127_21_13
hsa-miR-648 ctCACACTacacaca AAGUGUGC m6b Created HHFCT_98199_cluster-15127_21_13
hsa-miR-6867-5p ctcacacCACACACa UGUGUGUG m7b Disrupted HHFCT_98199_cluster-15127_21_13

Mutation Mutation ID Sample Name Cancer Type
chr21:g.45525921G>A COSM1414512 TCGA-AD-6895-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4685-5p gctctgtGCCCTGGt CCCAGGGC m7b Disrupted HHFKP_91449_cluster-15127_15_14
hsa-miR-6837-5p gctctgtGCCCTGGt ACCAGGGC m7b Disrupted HHFKP_91449_cluster-15127_15_14
hsa-miR-6841-5p gctctGTACCCTggt UAGGGUAC m7b Created HHFKP_91449_cluster-15127_15_14
hsa-miR-4685-5p gctctgtGCCCTGGt CCCAGGGC m7b Disrupted HHFKP_91449_cluster-15127_15_14
hsa-miR-6837-5p gctctgtGCCCTGGt ACCAGGGC m7b Disrupted HHFKP_91449_cluster-15127_15_14
hsa-miR-6841-5p gctctGTACCCTggt UAGGGUAC m7b Created HHFKP_91449_cluster-15127_15_14

Mutation Mutation ID Sample Name Cancer Type
chr21:g.45525916G>T COSM3551624 TCGA-EE-A29E-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4685-5p gtGCCCTGGtcttcg CCCAGGGC m7b (m7b->m6b) HHFKP_91449_cluster-15127_15_14
hsa-miR-6753-5p gtgCCCTGGTcttcg CACCAGGG m7b Disrupted HHFKP_91449_cluster-15127_15_14
hsa-miR-6837-5p gtGCCCTGGTcttcg ACCAGGGC m8a Disrupted HHFKP_91449_cluster-15127_15_14
hsa-miR-4685-5p gtGCCCTGGtcttcg CCCAGGGC m7b (m7b->m6b) HHFKP_91449_cluster-15127_15_14
hsa-miR-6753-5p gtgCCCTGGTcttcg CACCAGGG m7b Disrupted HHFKP_91449_cluster-15127_15_14
hsa-miR-6837-5p gtGCCCTGGTcttcg ACCAGGGC m8a Disrupted HHFKP_91449_cluster-15127_15_14

Mutation Mutation ID Sample Name Cancer Type
chr21:g.45525914GGT>ATT COSM4515597 CSCC-19-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4685-5p gtGCCCTGGtcttcggg CCCAGGGC m7b (m7b->m6b) HHFKP_91449_cluster-15127_15_14
hsa-miR-6507-5p gtgcccTATTCTTCggg GAAGAAUA m8a Created HHFKP_91449_cluster-15127_15_14
hsa-miR-6753-5p gtgCCCTGGTcttcggg CACCAGGG m7b Disrupted HHFKP_91449_cluster-15127_15_14
hsa-miR-6837-5p gtGCCCTGGTcttcggg ACCAGGGC m8a Disrupted HHFKP_91449_cluster-15127_15_14
hsa-miR-4685-5p gtGCCCTGGtcttcggg CCCAGGGC m7b (m7b->m6b) HHFKP_91449_cluster-15127_15_14
hsa-miR-6507-5p gtgcccTATTCTTCggg GAAGAAUA m8a Created HHFKP_91449_cluster-15127_15_14
hsa-miR-6753-5p gtgCCCTGGTcttcggg CACCAGGG m7b Disrupted HHFKP_91449_cluster-15127_15_14
hsa-miR-6837-5p gtGCCCTGGTcttcggg ACCAGGGC m8a Disrupted HHFKP_91449_cluster-15127_15_14

Mutation Mutation ID Sample Name Cancer Type
chr21:g.45525910C>T COSM2821972 TCGA-CD-A4MG-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-3p tggtCTTTGGGgtca GCCCAAAG m7b Created HHFKP_91449_cluster-15127_15_14
hsa-miR-4671-5p tggTCTTCGGggtca ACCGAAGA m7b Disrupted HHFKP_91449_cluster-15127_15_14
hsa-miR-186-3p tggtCTTTGGGgtca GCCCAAAG m7b Created HHFKP_91449_cluster-15127_15_14
hsa-miR-4671-5p tggTCTTCGGggtca ACCGAAGA m7b Disrupted HHFKP_91449_cluster-15127_15_14

Mutation Mutation ID Sample Name Cancer Type
chr21:g.45525888A>G COSM1031444 TCGA-AX-A0J1-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3688-5p ctTTGCCACcatcgt AGUGGCAA m7b (m7b->m6b) HHKTA_51675_NM_194255|1329|1368|1.29803823155271|0.903881454512438
hsa-miR-6770-3p ctttGCCGCCAtcgt CUGGCGGC m7b Created HHKTA_51675_NM_194255|1329|1368|1.29803823155271|0.903881454512438
hsa-miR-3688-5p ctTTGCCACcatcgt AGUGGCAA m7b (m7b->m6b) HHKTA_51675_NM_194255|1329|1368|1.29803823155271|0.903881454512438
hsa-miR-6770-3p ctttGCCGCCAtcgt CUGGCGGC m7b Created HHKTA_51675_NM_194255|1329|1368|1.29803823155271|0.903881454512438
Mutation Mutation ID Sample Name Cancer Type
chr21:g.45525884T>C COSM1307892 TCGA-DK-A1AD-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr21:g.45525883C>T COSM3551621 TCGA-EE-A29M-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr21:g.45525874C>T COSM3551620 TCGA-EB-A41A-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1272 tcaagacCATCATCa GAUGAUGA m7a Disrupted HHKTA_51675_NM_194255|1329|1368|1.29803823155271|0.903881454512438
hsa-miR-1322 tcaagacCATCATCa GAUGAUGC m7a Disrupted HHKTA_51675_NM_194255|1329|1368|1.29803823155271|0.903881454512438
hsa-miR-3682-3p tcaagacTATCATCa UGAUGAUA m7b Created HHKTA_51675_NM_194255|1329|1368|1.29803823155271|0.903881454512438
hsa-miR-8069 tcaagACCATCatca GGAUGGUU m6b Disrupted HHKTA_51675_NM_194255|1329|1368|1.29803823155271|0.903881454512438
hsa-miR-1272 tcaagacCATCATCa GAUGAUGA m7a Disrupted HHKTA_51675_NM_194255|1329|1368|1.29803823155271|0.903881454512438
hsa-miR-1322 tcaagacCATCATCa GAUGAUGC m7a Disrupted HHKTA_51675_NM_194255|1329|1368|1.29803823155271|0.903881454512438
hsa-miR-3682-3p tcaagacTATCATCa UGAUGAUA m7b Created HHKTA_51675_NM_194255|1329|1368|1.29803823155271|0.903881454512438
hsa-miR-8069 tcaagACCATCatca GGAUGGUU m6b Disrupted HHKTA_51675_NM_194255|1329|1368|1.29803823155271|0.903881454512438

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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