SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001145097 |
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Gene Symbol: | SKIL |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.170393158C>T | COSN7626575 | PCSI_0112_Pa_P | [pancreas][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3613-3p | ataaTTTTTGaactt | ACAAAAAA | m6b | Created | HHFCT_112713_cluster-16263_36_61 |
hsa-miR-5000-5p | ataatttCTGAACTt | CAGUUCAG | m7b | Disrupted | HHFCT_112713_cluster-16263_36_61 |
hsa-miR-548c-3p | ataATTTTTGaactt | CAAAAAUC | m7a | Created | HHFCT_112713_cluster-16263_36_61 |
hsa-miR-3613-3p | ataaTTTTTGaactt | ACAAAAAA | m6b | Created | HHFKP_104823_cluster-16263_31_156 |
hsa-miR-5000-5p | ataatttCTGAACTt | CAGUUCAG | m7b | Disrupted | HHFKP_104823_cluster-16263_31_156 |
hsa-miR-548c-3p | ataATTTTTGaactt | CAAAAAUC | m7a | Created | HHFKP_104823_cluster-16263_31_156 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.170392456G>GT | COSN5853525 | ||||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-548ac | tgacaaGGTTTTTtt | CAAAAACC | m7b | Disrupted | HHFCT_112708_cluster-16263_29_37 |
hsa-miR-548bb-3p | tgacaaGGTTTTTtt | CAAAAACC | m7b | Disrupted | HHFCT_112708_cluster-16263_29_37 |
hsa-miR-548d-3p | tgacaaGGTTTTTtt | CAAAAACC | m7b | Disrupted | HHFCT_112708_cluster-16263_29_37 |
hsa-miR-548h-3p | tgacaaGGTTTTTtt | CAAAAACC | m7b | Disrupted | HHFCT_112708_cluster-16263_29_37 |
hsa-miR-548z | tgacaaGGTTTTTtt | CAAAAACC | m7b | Disrupted | HHFCT_112708_cluster-16263_29_37 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.170391210A>G | COSM1642173 | pfg008T | [stomach][NS][carcinoma][intestinal_adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4269 | aaaatGTGCCTGtga | GCAGGCAC | m7b | Created | HHFCT_112707_cluster-16263_28_13 |
hsa-miR-4438 | aaaatgtGCCTGTGa | CACAGGCU | m7a | Created | HHFCT_112707_cluster-16263_28_13 |
hsa-miR-5582-5p | aaaaTGTGCCTgtga | UAGGCACA | m7b | Created | HHFCT_112707_cluster-16263_28_13 |
hsa-miR-6715b-5p | aaaatGTGCCTGTga | ACAGGCAC | m8a | Created | HHFCT_112707_cluster-16263_28_13 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.170391203A>G | COSM1041082 | TCGA-FI-A2EW-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1250-3p | tgaagcaAAAATGTa | ACAUUUUC | m7a | Disrupted | HHFCT_112707_cluster-16263_28_13 |
hsa-miR-129-5p | tgaaGCAAAAAtgta | CUUUUUGC | m7b | Disrupted | HHFCT_112707_cluster-16263_28_13 |
hsa-miR-153-5p | tgaagcAAAAATGta | UCAUUUUU | m7b | Disrupted | HHFCT_112707_cluster-16263_28_13 |
hsa-miR-544a | tgaaGCAGAAatgta | AUUCUGCA | m6b | Created | HHFCT_112707_cluster-16263_28_13 |
hsa-miR-6071 | tgaAGCAGAAatgta | UUCUGCUG | m7a | Created | HHFCT_112707_cluster-16263_28_13 |
hsa-miR-6738-3p | tgaaGCAGAAatgta | CUUCUGCC | m6b | Created | HHFCT_112707_cluster-16263_28_13 |
hsa-miR-6828-3p | tgaAGCAGAaatgta | AUCUGCUC | m6b | Created | HHFCT_112707_cluster-16263_28_13 |
hsa-miR-6885-3p | tgAAGCAAAaatgta | CUUUGCUU | m7b | (m7b->m6b) | HHFCT_112707_cluster-16263_28_13 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.170391200G>A | COSM4797814 | CHC892T | [liver][NS][carcinoma][hepatocellular_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-129-5p | taatgaaGCAAAAAt | CUUUUUGC | m7b | Disrupted | HHFCT_112707_cluster-16263_28_13 |
hsa-miR-3977 | taaTGAAGCAaaaat | GUGCUUCA | m7b | Disrupted | HHFCT_112707_cluster-16263_28_13 |
hsa-miR-6885-3p | taatgAAGCAAAaat | CUUUGCUU | m7b | Disrupted | HHFCT_112707_cluster-16263_28_13 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.170391184T>A | COSM3590041 | TCGA-D3-A51N-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4268 | aaaaaatAGGAGCag | GGCUCCUC | m6b | Created | HHFCT_112707_cluster-16263_28_13 |
hsa-miR-4448 | aaaaaatAGGAGCag | GGCUCCUU | m6b | Created | HHFCT_112707_cluster-16263_28_13 |
hsa-miR-6772-3p | aaaaaatAGGAGCAg | UUGCUCCU | m7b | Created | HHFCT_112707_cluster-16263_28_13 |
hsa-miR-4268 | aaaaaatAGGAGCag | GGCUCCUC | m6b | Created | HHKTA_52564_NM_005414|2494|2533|1.29803823155271|0.151460852461792 |
hsa-miR-4448 | aaaaaatAGGAGCag | GGCUCCUU | m6b | Created | HHKTA_52564_NM_005414|2494|2533|1.29803823155271|0.151460852461792 |
hsa-miR-6772-3p | aaaaaatAGGAGCAg | UUGCUCCU | m7b | Created | HHKTA_52564_NM_005414|2494|2533|1.29803823155271|0.151460852461792 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.170391168G>T | COSM1041080 | TCGA-D1-A17Q-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1264 | acagaAAGACTTaga | CAAGUCUU | m7b | Disrupted | HHKTA_52564_NM_005414|2494|2533|1.29803823155271|0.151460852461792 |
hsa-miR-3184-3p | acagaaAGACTTaga | AAAGUCUC | m6b | Disrupted | HHKTA_52564_NM_005414|2494|2533|1.29803823155271|0.151460852461792 |
hsa-miR-6830-3p | acaGAAAGACttaga | UGUCUUUC | m7b | Disrupted | HHKTA_52564_NM_005414|2494|2533|1.29803823155271|0.151460852461792 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.170391164G>C | COSM419714 | TCGA-BT-A20J-01 | [urinary_tract][bladder][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-26b-3p | ttGAACAGaaagact | CCUGUUCU | m6b | Disrupted | HHKTA_52564_NM_005414|2494|2533|1.29803823155271|0.151460852461792 |
hsa-miR-4652-3p | ttgAACAGAAagact | GUUCUGUU | m7b | Disrupted | HHKTA_52564_NM_005414|2494|2533|1.29803823155271|0.151460852461792 |
hsa-miR-5010-3p | ttgaACACAAAgact | UUUUGUGU | m7b | Created | HHKTA_52564_NM_005414|2494|2533|1.29803823155271|0.151460852461792 |
hsa-miR-599 | ttgaACACAAagact | GUUGUGUC | m6b | Created | HHKTA_52564_NM_005414|2494|2533|1.29803823155271|0.151460852461792 |
hsa-miR-6830-3p | ttgaacaGAAAGACt | UGUCUUUC | m7b | Disrupted | HHKTA_52564_NM_005414|2494|2533|1.29803823155271|0.151460852461792 |
hsa-miR-6844 | ttgaacACAAAGAct | UUCUUUGU | m7b | Created | HHKTA_52564_NM_005414|2494|2533|1.29803823155271|0.151460852461792 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.170381326C>G | COSM4390050 | TCGA-BT-A42B-01 | [urinary_tract][bladder][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3646 | acacaTTCATTTTta | AAAAUGAA | m8a | Disrupted | HPCB3_15613_G21413.1_170099129 |
hsa-miR-3662 | acacatTCATTTTta | GAAAAUGA | m7b | Disrupted | HPCB3_15613_G21413.1_170099129 |
hsa-miR-548c-3p | acacattGATTTTTa | CAAAAAUC | m7b | Created | HPCB3_15613_G21413.1_170099129 |
hsa-miR-551b-5p | acacaTTGATTTtta | GAAAUCAA | m7b | Created | HPCB3_15613_G21413.1_170099129 |
hsa-miR-3646 | acacaTTCATTTTta | AAAAUGAA | m8a | Disrupted | HPRO6_54323_G64553.1_170099126 |
hsa-miR-3662 | acacatTCATTTTta | GAAAAUGA | m7b | Disrupted | HPRO6_54323_G64553.1_170099126 |
hsa-miR-548c-3p | acacattGATTTTTa | CAAAAAUC | m7b | Created | HPRO6_54323_G64553.1_170099126 |
hsa-miR-551b-5p | acacaTTGATTTtta | GAAAUCAA | m7b | Created | HPRO6_54323_G64553.1_170099126 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.170381272A>T | COSM1537127 | TCGA-50-5930-01 | [lung][right_lower_lobe][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4645-3p | gaatTACTGTCatgg | AGACAGUA | m7b | Created | HHFCT_112705_cluster-16263_26_12 |
hsa-miR-943 | gaattACAGTCAtgg | CUGACUGU | m7b | Disrupted | HHFCT_112705_cluster-16263_26_12 |