SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | hsa_circ_0047685 |
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Gene Symbol: | SKA1 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr18:g.50380179G>A | COSM1130062 | TCGA-CH-5739-01 | [prostate][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-6504-3p | gatcatTGTAATaaa | CAUUACAG | m6b | Disrupted | HHKTA_22226_NM_001039535|335|374|3.28836351993354|0.421569625975454 |
hsa-miR-556-3p | gatcattGTAATAaa | AUAUUACC | m6b | Disrupted | HHKTA_22226_NM_001039535|335|374|3.28836351993354|0.421569625975454 |
hsa-miR-4795-3p | gatcattATAATAaa | AUAUUAUU | m6b | Created | HHKTA_22226_NM_001039535|335|374|3.28836351993354|0.421569625975454 |
hsa-miR-374b-5p | gatcATTATAataaa | AUAUAAUA | m6b | Created | HHKTA_22226_NM_001039535|335|374|3.28836351993354|0.421569625975454 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr18:g.50380175C>A | COSM1136062 | TCGA-A3-3372-01 | [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-7849-3p | atgagatAATTGTaa | GACAAUUG | m6b | Created | HHKTA_22226_NM_001039535|335|374|3.28836351993354|0.421569625975454 |
hsa-miR-7641 | atGAGATCAttgtaa | UUGAUCUC | m7b | (m7b->m6b) | HHKTA_22226_NM_001039535|335|374|3.28836351993354|0.421569625975454 |
hsa-miR-4695-3p | aTGAGATCAttgtaa | UGAUCUCA | m8a | (m8a->m7a) | HHKTA_22226_NM_001039535|335|374|3.28836351993354|0.421569625975454 |