SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0016916
Gene Symbol: SIPA1L2
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.232491014G>T COSM1639751 pfg029T [stomach][NS][adenocarcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-936 cTCTACTGctaggca ACAGUAGA m7b Disrupted HHFKP_7245_cluster-2241_23_8
hsa-miR-4274 ctctACTGCTaggca CAGCAGUC m6b Disrupted HHFKP_7245_cluster-2241_23_8
hsa-miR-4519 ctctACTGCTaggca CAGCAGUG m6b Disrupted HHFKP_7245_cluster-2241_23_8
hsa-miR-548ao-5p ctcTACTTCTaggca AGAAGUAA m7a Created HHFKP_7245_cluster-2241_23_8
hsa-miR-548ax ctcTACTTCTaggca AGAAGUAA m7a Created HHFKP_7245_cluster-2241_23_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.232491000C>T COSM3485201 TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-517a-3p atggtacTGCACGAg AUCGUGCA m7b Created HHFCT_7367_cluster-2241_21_8
hsa-miR-517b-3p atggtacTGCACGAg AUCGUGCA m7b Created HHFCT_7367_cluster-2241_21_8
hsa-miR-517c-3p atggtacTGCACGAg AUCGUGCA m7b Created HHFCT_7367_cluster-2241_21_8
hsa-miR-624-5p aTGGTACTgcacgag UAGUACCA m7b Created HHFCT_7367_cluster-2241_21_8
hsa-miR-143-5p atggtACTGCACgag GGUGCAGU m7b Created HHFCT_7367_cluster-2241_21_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.232490996C>T COSM3966356 TCGA-DU-5874-01 [central_nervous_system][brain][glioma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6891-3p taccgcATGAGGact CCCUCAUC m6b Created HHFCT_7367_cluster-2241_21_8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.232479703CTA>A COSM1340123 TCGA-AA-3492-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3976 actcTCTCTATAccaca UAUAGAGA m8a Disrupted HPRO6_9470_G10897.1_232615454
hsa-miR-6856-5p actCTCTCTataccaca AAGAGAGG m6b Disrupted HPRO6_9470_G10897.1_232615454

Mutation Mutation ID Sample Name Cancer Type
chr1:g.232479701A>G COSM2157268 TCGA-27-1835-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3688-5p tctctaTGCCACata AGUGGCAA m6b Created HPRO6_9470_G10897.1_232615454
hsa-miR-3976 TCTCTATAccacata UAUAGAGA m8a Disrupted HPRO6_9470_G10897.1_232615454
hsa-miR-891a-3p tctctaTGCCACata AGUGGCAC m6b Created HPRO6_9470_G10897.1_232615454

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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