SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0016913
Gene Symbol: SIPA1L2
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.232461069C>T COSM277273 TCGA-AA-A00N-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273c gaaTTGTCGCagatg GGCGACAA m7b Disrupted HHFCT_7365_cluster-2241_19_204
hsa-miR-4772-3p gaattGTTGCAGatg CCUGCAAC m7b Created HHFCT_7365_cluster-2241_19_204
hsa-miR-6068 gaattgTCGCAGatg CCUGCGAG m6b Disrupted HHFCT_7365_cluster-2241_19_204

Mutation Mutation ID Sample Name Cancer Type
chr1:g.232439124TGAGA>A COSM4612014 HCA7 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1285-5p atctcaGTGAGATatcctc GAUCUCAC m7b Disrupted HPRO6_9469_G10895.1_232574864
hsa-miR-1304-3p atctCAGTGAGAtatcctc UCUCACUG m8a Disrupted HPRO6_9469_G10895.1_232574864
hsa-miR-144-5p atctcaGATATCCtc GGAUAUCA m7a Created HPRO6_9469_G10895.1_232574864
hsa-miR-181b-2-3p atcTCAGTGAGatatcctc CUCACUGA m8a Disrupted HPRO6_9469_G10895.1_232574864
hsa-miR-181b-3p atcTCAGTGAGatatcctc CUCACUGA m8a Disrupted HPRO6_9469_G10895.1_232574864
hsa-miR-3200-5p atCTCAGATatcctc AAUCUGAG m7b (m6b->m7b) HPRO6_9469_G10895.1_232574864
hsa-miR-3201 atctcagATATCCtc GGGAUAUG m6b Created HPRO6_9469_G10895.1_232574864
hsa-miR-4420 atcTCAGTGAgatatcctc GUCACUGA m7b Disrupted HPRO6_9469_G10895.1_232574864
hsa-miR-4791 atctcagATATCCtc UGGAUAUG m6b Created HPRO6_9469_G10895.1_232574864
hsa-miR-1285-5p atctcaGTGAGATatcctc GAUCUCAC m7b Disrupted HPRO6_9469_G10895.1_232574864
hsa-miR-1304-3p atctCAGTGAGAtatcctc UCUCACUG m8a Disrupted HPRO6_9469_G10895.1_232574864
hsa-miR-144-5p atctcaGATATCCtc GGAUAUCA m7a Created HPRO6_9469_G10895.1_232574864
hsa-miR-181b-2-3p atcTCAGTGAGatatcctc CUCACUGA m8a Disrupted HPRO6_9469_G10895.1_232574864
hsa-miR-181b-3p atcTCAGTGAGatatcctc CUCACUGA m8a Disrupted HPRO6_9469_G10895.1_232574864
hsa-miR-3200-5p atCTCAGATatcctc AAUCUGAG m7b (m6b->m7b) HPRO6_9469_G10895.1_232574864
hsa-miR-3201 atctcagATATCCtc GGGAUAUG m6b Created HPRO6_9469_G10895.1_232574864
hsa-miR-4420 atcTCAGTGAgatatcctc GUCACUGA m7b Disrupted HPRO6_9469_G10895.1_232574864
hsa-miR-4791 atctcagATATCCtc UGGAUAUG m6b Created HPRO6_9469_G10895.1_232574864

Mutation Mutation ID Sample Name Cancer Type
chr1:g.232439117C>G COSM3789643 TCGA-GC-A3YS-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1185-5p aTATCCTCTcattcc AGAGGAUA m8a (m8a->m7a) HPRO6_9469_G10895.1_232574864
hsa-miR-3679-5p aTATCCTCtcattcc UGAGGAUA m7b Disrupted HPRO6_9469_G10895.1_232574864
hsa-miR-4712-3p atatcCTCTCATTcc AAUGAGAG m8a Disrupted HPRO6_9469_G10895.1_232574864
hsa-miR-6859-5p ataTCCTCTCattcc GAGAGGAA m7a Disrupted HPRO6_9469_G10895.1_232574864
hsa-miR-1185-5p aTATCCTCTcattcc AGAGGAUA m8a (m8a->m7a) HPRO6_9469_G10895.1_232574864
hsa-miR-3679-5p aTATCCTCtcattcc UGAGGAUA m7b Disrupted HPRO6_9469_G10895.1_232574864
hsa-miR-4712-3p atatcCTCTCATTcc AAUGAGAG m8a Disrupted HPRO6_9469_G10895.1_232574864
hsa-miR-6859-5p ataTCCTCTCattcc GAGAGGAA m7a Disrupted HPRO6_9469_G10895.1_232574864

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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