SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0016912
Gene Symbol: SIPA1L2
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.232425761G>A COSM905565 TCGA-AX-A0J1-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-147b aCCGCACACtgtctg GUGUGCGG m8a (m7a->m8a) HHFKP_7238_cluster-2241_16_11
hsa-miR-2277-3p accgcaCGCTGTCtg UGACAGCG m7b Disrupted HHFKP_7238_cluster-2241_16_11
hsa-miR-4302 accgCACACTGtctg CCAGUGUG m7b Created HHFKP_7238_cluster-2241_16_11
hsa-miR-648 accGCACACTgtctg AAGUGUGC m7b Created HHFKP_7238_cluster-2241_16_11
hsa-miR-147b aCCGCACACtgtctg GUGUGCGG m8a (m7a->m8a) HHFKP_7238_cluster-2241_16_11
hsa-miR-2277-3p accgcaCGCTGTCtg UGACAGCG m7b Disrupted HHFKP_7238_cluster-2241_16_11
hsa-miR-4302 accgCACACTGtctg CCAGUGUG m7b Created HHFKP_7238_cluster-2241_16_11
hsa-miR-648 accGCACACTgtctg AAGUGUGC m7b Created HHFKP_7238_cluster-2241_16_11

Mutation Mutation ID Sample Name Cancer Type
chr1:g.232425755T>C COSM905564 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1324 cgCTGTCTGacgaga CCAGACAG m7b (m7b->m6b) HHFKP_7238_cluster-2241_16_11
hsa-miR-1324 cgCTGTCTGacgaga CCAGACAG m7b (m7b->m6b) HHFKP_7238_cluster-2241_16_11

Mutation Mutation ID Sample Name Cancer Type
chr1:g.232425749G>C COSM4858432 TCGA-21-1070-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-626 ctgacGACAGCatct AGCUGUCU m6b Created HHFKP_7238_cluster-2241_16_11
hsa-miR-6876-3p ctgacGACAGCatct AGCUGUCU m6b Created HHFKP_7238_cluster-2241_16_11
hsa-miR-626 ctgacGACAGCatct AGCUGUCU m6b Created HHFKP_7238_cluster-2241_16_11
hsa-miR-6876-3p ctgacGACAGCatct AGCUGUCU m6b Created HHFKP_7238_cluster-2241_16_11

Mutation Mutation ID Sample Name Cancer Type
chr1:g.232425738G>C COSM1748222 B96-Tumor [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-143-5p atCTGCACCaacagg GGUGCAGU m7a (m6a->m7a) HHFKP_7238_cluster-2241_16_11
hsa-miR-3158-5p aTCTGCAGcaacagg CCUGCAGA m7b Disrupted HHFKP_7238_cluster-2241_16_11
hsa-miR-367-5p atctgcaGCAACAGg ACUGUUGC m7b Disrupted HHFKP_7238_cluster-2241_16_11
hsa-miR-143-5p atCTGCACCaacagg GGUGCAGU m7a (m6a->m7a) HHFKP_7238_cluster-2241_16_11
hsa-miR-3158-5p aTCTGCAGcaacagg CCUGCAGA m7b Disrupted HHFKP_7238_cluster-2241_16_11
hsa-miR-367-5p atctgcaGCAACAGg ACUGUUGC m7b Disrupted HHFKP_7238_cluster-2241_16_11

Mutation Mutation ID Sample Name Cancer Type
chr1:g.232425732G>T COSM4029539 TCGA-CD-A4MJ-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1266-3p agcAACAGGaggggg CCCUGUUC m6b Disrupted HHFKP_7238_cluster-2241_16_11
hsa-miR-1267 agCAACAGGaggggg CCUGUUGA m7a (m7a->m6a) HHFKP_7238_cluster-2241_16_11
hsa-miR-4667-3p agcaacAGGAGGGgg UCCCUCCU m7b Disrupted HHFKP_7238_cluster-2241_16_11
hsa-miR-660-3p agcaaCAGGAGGggg ACCUCCUG m7b Disrupted HHFKP_7238_cluster-2241_16_11
hsa-miR-6887-3p agcaacaGGAGGGGg UCCCCUCC m7b Disrupted HHFKP_7238_cluster-2241_16_11
hsa-miR-1266-3p agcAACAGGaggggg CCCUGUUC m6b Disrupted HHFKP_7238_cluster-2241_16_11
hsa-miR-1267 agCAACAGGaggggg CCUGUUGA m7a (m7a->m6a) HHFKP_7238_cluster-2241_16_11
hsa-miR-367-5p aGCAACAGgaggggg ACUGUUGC m7b Disrupted HHFKP_7238_cluster-2241_16_11
hsa-miR-4667-3p agcaacAGGAGGGgg UCCCUCCU m7b Disrupted HHFKP_7238_cluster-2241_16_11
hsa-miR-660-3p agcaaCAGGAGGggg ACCUCCUG m7b Disrupted HHFKP_7238_cluster-2241_16_11
hsa-miR-6887-3p agcaacaGGAGGGGg UCCCCUCC m7b Disrupted HHFKP_7238_cluster-2241_16_11

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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