SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0058787
Gene Symbol: SH3BP4
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.235043133G>C COSM1531349 TCGA-55-7570-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-191-3p tctgccGCGCAGagc GCUGCGCU m6b Created HPTA3_10991_G17319.1_235951781
hsa-miR-2277-5p tctgCCGCGCagagc AGCGCGGG m6b Created HPTA3_10991_G17319.1_235951781
hsa-miR-324-3p tctgccGGGCAGagc ACUGCCCC m6b Disrupted HPTA3_10991_G17319.1_235951781
hsa-miR-4479 tctGCCGCGCagagc CGCGCGGC m7b Created HPTA3_10991_G17319.1_235951781
hsa-miR-18a-3p tctgccGGGCAGagc ACUGCCCU m6b Disrupted HPTA3_10991_G17319.1_235951781
hsa-miR-6820-5p tCTGCCGCgcagagc UGCGGCAG m7b Created HPTA3_10991_G17319.1_235951781
hsa-miR-324-3p tctgccGGGCAGagc ACUGCCCC m6b Disrupted HPRO6_45246_G53550.1_235951781
hsa-miR-4479 tctGCCGCGCagagc CGCGCGGC m7b Created HPRO6_45246_G53550.1_235951781
hsa-miR-2277-5p tctgCCGCGCagagc AGCGCGGG m6b Created HPRO6_45246_G53550.1_235951781
hsa-miR-6820-5p tCTGCCGCgcagagc UGCGGCAG m7b Created HPRO6_45246_G53550.1_235951781
hsa-miR-18a-3p tctgccGGGCAGagc ACUGCCCU m6b Disrupted HPRO6_45246_G53550.1_235951781
hsa-miR-191-3p tctgccGCGCAGagc GCUGCGCU m6b Created HPRO6_45246_G53550.1_235951781
Mutation Mutation ID Sample Name Cancer Type
chr2:g.235043130C>T COSM1018226 TCGA-D1-A0ZO-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.235042707G>A COSM442535 TCGA-BH-A0AW-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4259 agtaCCCAACTttcc CAGUUGGG m7b Created HHFCT_92888_cluster-13451_10_20

Mutation Mutation ID Sample Name Cancer Type
chr2:g.235042307C>A COSM1664149 ccRCC-89 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1262 cgccaggCACCCAac AUGGGUGA m6b Disrupted HHFKP_86241_cluster-13451_6_24
hsa-miR-1271-3p cgcCAGGCACccaac AGUGCCUG m7b Disrupted HHFKP_86241_cluster-13451_6_24
hsa-miR-1343-3p cgCCAGGAacccaac CUCCUGGG m6b Created HHFKP_86241_cluster-13451_6_24
hsa-miR-23a-5p cgccaGGAACCCaac GGGGUUCC m7b Created HHFKP_86241_cluster-13451_6_24
hsa-miR-23b-5p cgccaGGAACCCAac UGGGUUCC m8a Created HHFKP_86241_cluster-13451_6_24
hsa-miR-3940-5p cgccaggAACCCAac GUGGGUUG m6b Created HHFKP_86241_cluster-13451_6_24
hsa-miR-4507 cgccaggAACCCAac CUGGGUUG m6b Created HHFKP_86241_cluster-13451_6_24
hsa-miR-4701-3p cgccaggCACCCAac AUGGGUGA m6b Disrupted HHFKP_86241_cluster-13451_6_24
hsa-miR-550a-3-5p cgcCAGGCACccaac AGUGCCUG m7b Disrupted HHFKP_86241_cluster-13451_6_24
hsa-miR-550a-5p cgcCAGGCACccaac AGUGCCUG m7b Disrupted HHFKP_86241_cluster-13451_6_24
hsa-miR-6736-5p cgccaggCACCCAac CUGGGUGA m6b Disrupted HHFKP_86241_cluster-13451_6_24
hsa-miR-6741-5p cgccagGCACCCAac GUGGGUGC m7b Disrupted HHFKP_86241_cluster-13451_6_24

Mutation Mutation ID Sample Name Cancer Type
chr2:g.235042301G>A COSM442534 TCGA-AO-A0J7-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3650 gtcACACACCaggca AGGUGUGU m7b Created HHFKP_86241_cluster-13451_6_24
hsa-miR-6818-5p gTCACACAccaggca UUGUGUGA m7b Created HHFKP_86241_cluster-13451_6_24
hsa-miR-6867-5p gtCACACACcaggca UGUGUGUG m7b (m6b->m7b) HHFKP_86241_cluster-13451_6_24
hsa-miR-7978 gtcacACACCAGgca UCUGGUGU m7b Created HHFKP_86241_cluster-13451_6_24

Mutation Mutation ID Sample Name Cancer Type
chr2:g.235042286T>A COSM1614551 HCC102T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-198 ctcCTGGACagcgag GGUCCAGA m6b Created HHFKP_86241_cluster-13451_6_24
hsa-miR-665 CTCCTGGTcagcgag ACCAGGAG m8a Disrupted HHFKP_86241_cluster-13451_6_24
hsa-miR-6825-3p ctcctgGTCAGCGag GCGCUGAC m7b Disrupted HHFKP_86241_cluster-13451_6_24

Mutation Mutation ID Sample Name Cancer Type
chr2:g.235042152C>G COSM3838968 TCGA-D8-A1J8-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1185-5p gcATCCTCTaccctt AGAGGAUA m7a (m7a->m6a) HHFKP_86240_cluster-13451_5_16
hsa-miR-197-5p gcatccTCTACCCtt CGGGUAGA m7b Disrupted HHFKP_86240_cluster-13451_5_16
hsa-miR-3132 gcatccTCTACCCtt UGGGUAGA m7b Disrupted HHFKP_86240_cluster-13451_5_16
hsa-miR-3605-5p gCATCCTCtaccctt UGAGGAUG m7b Disrupted HHFKP_86240_cluster-13451_5_16
hsa-miR-3916 gcaTCCTCTaccctt AAGAGGAA m6b Disrupted HHFKP_86240_cluster-13451_5_16
hsa-miR-4451 gcatcCTCTACCctt UGGUAGAG m7b Disrupted HHFKP_86240_cluster-13451_5_16
hsa-miR-4700-3p gcaTCCTGTaccctt CACAGGAC m6b Created HHFKP_86240_cluster-13451_5_16
hsa-miR-6755-5p gcatcctCTACCCTt UAGGGUAG m7b Disrupted HHFKP_86240_cluster-13451_5_16
hsa-miR-6841-5p gcatcctGTACCCTt UAGGGUAC m7b Created HHFKP_86240_cluster-13451_5_16
hsa-miR-6859-5p gcaTCCTCTaccctt GAGAGGAA m6b Disrupted HHFKP_86240_cluster-13451_5_16
hsa-miR-877-5p gcaTCCTCTACcctt GUAGAGGA m8a Disrupted HHFKP_86240_cluster-13451_5_16
Mutation Mutation ID Sample Name Cancer Type
chr2:g.235042136A>G COSM4725638 T1154 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.235042129G>A COSM1318962 TCGA-AB-2830-03 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-196b-3p gGCTGTCGtggccca UCGACAGC m7b Disrupted HHFCT_92887_cluster-13451_9_16
hsa-miR-6508-3p ggctgtcATGGCCCa UGGGCCAU m7b Created HHFCT_92887_cluster-13451_9_16
hsa-miR-196b-3p gGCTGTCGtggccca UCGACAGC m7b Disrupted HHFKP_86240_cluster-13451_5_16
hsa-miR-6508-3p ggctgtcATGGCCCa UGGGCCAU m7b Created HHFKP_86240_cluster-13451_5_16

Mutation Mutation ID Sample Name Cancer Type
chr2:g.235042128C>T COSM3579480 TCGA-EE-A3AG-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-196b-3p tgGCTGTCGtggccc UCGACAGC m7b (m7b->m6b) HHFCT_92887_cluster-13451_9_16
hsa-miR-5003-5p tggcTGTTGTGgccc UCACAACA m7b Created HHFCT_92887_cluster-13451_9_16
hsa-miR-196b-3p tgGCTGTCGtggccc UCGACAGC m7b (m7b->m6b) HHFKP_86240_cluster-13451_5_16
hsa-miR-5003-5p tggcTGTTGTGgccc UCACAACA m7b Created HHFKP_86240_cluster-13451_5_16

Mutation Mutation ID Sample Name Cancer Type
chr2:g.235042119C>T COSM1018221 TCGA-27-1833-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-449b-3p gtatgtaTGTGGCTg CAGCCACA m7b Created HHFKP_86240_cluster-13451_5_16
Mutation Mutation ID Sample Name Cancer Type
chr2:g.235041554C>T COSM4092579 TCGA-BR-8487-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.235041543T>C COSM4133563 PTC-7C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6090 agtccgaCGCTCCCa GGGGAGCG m7b Created HPRO6_45245_G53549.1_235950205

Mutation Mutation ID Sample Name Cancer Type
chr2:g.235041376A>G COSM4092578 TCGA-BR-8361-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1469 ctccttCGCCGAatc CUCGGCGC m6b Created HPRO6_45243_G53547.1_235950020
hsa-miR-4285 ctcctTCGCCGaatc GCGGCGAG m6b Created HPRO6_45243_G53547.1_235950020
hsa-miR-598-5p ctcctTCACCGaatc GCGGUGAU m6b Disrupted HPRO6_45243_G53547.1_235950020
hsa-miR-1469 ctccttCGCCGAatc CUCGGCGC m6b Created HPTK1_17263_G20531.1_235950020
hsa-miR-4285 ctcctTCGCCGaatc GCGGCGAG m6b Created HPTK1_17263_G20531.1_235950020
hsa-miR-598-5p ctcctTCACCGaatc GCGGUGAU m6b Disrupted HPTK1_17263_G20531.1_235950020

Mutation Mutation ID Sample Name Cancer Type
chr2:g.235040935A>ANN COSM442533 TCGA-AN-A0FL-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-33a-5p tttcggaAATGCAaa GUGCAUUG m6b Disrupted HPRO6_45242_G53546.1_235949559
hsa-miR-33b-5p tttcggaAATGCAaa GUGCAUUG m6b Disrupted HPRO6_45242_G53546.1_235949559
hsa-miR-33a-5p tttcggaAATGCAaa GUGCAUUG m6b Disrupted HPTA1_6694_G9443.1_235949559
hsa-miR-33b-5p tttcggaAATGCAaa GUGCAUUG m6b Disrupted HPTA1_6694_G9443.1_235949559
hsa-miR-33a-5p tttcggaAATGCAaa GUGCAUUG m6b Disrupted HPTA3_10990_G17318.1_235949559
hsa-miR-33b-5p tttcggaAATGCAaa GUGCAUUG m6b Disrupted HPTA3_10990_G17318.1_235949559

Mutation Mutation ID Sample Name Cancer Type
chr2:g.235040931C>T COSM1018212 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6730-5p cACCTTTCggaaatg AGAAAGGU m7b Disrupted HPRO6_45242_G53546.1_235949559
hsa-miR-6730-5p cACCTTTCggaaatg AGAAAGGU m7b Disrupted HPTA1_6694_G9443.1_235949559
hsa-miR-6730-5p cACCTTTCggaaatg AGAAAGGU m7b Disrupted HPTA3_10990_G17318.1_235949559

Mutation Mutation ID Sample Name Cancer Type
chr2:g.235040918A>G COSM4725634 T368 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1227-5p gtagacaGCCCCACa GUGGGGCC m7a Created HPRO6_45242_G53546.1_235949559
hsa-miR-185-3p gtagaCAGCCCCaca AGGGGCUG m7b Created HPRO6_45242_G53546.1_235949559
hsa-miR-193b-5p gtagacAACCCCaca CGGGGUUU m6b Disrupted HPRO6_45242_G53546.1_235949559
hsa-miR-3151-5p gtagacaGCCCCACa GGUGGGGC m7b Created HPRO6_45242_G53546.1_235949559
hsa-miR-3170 gtagacAACCCCAca CUGGGGUU m7b Disrupted HPRO6_45242_G53546.1_235949559
hsa-miR-323b-5p gtaGACAACCccaca AGGUUGUC m7b Disrupted HPRO6_45242_G53546.1_235949559
hsa-miR-410-5p gtaGACAACCccaca AGGUUGUC m7b Disrupted HPRO6_45242_G53546.1_235949559
hsa-miR-4492 gtagaCAGCCCCaca GGGGCUGG m7a Created HPRO6_45242_G53546.1_235949559
hsa-miR-4675 gtagACAGCCCCaca GGGGCUGU m8a Created HPRO6_45242_G53546.1_235949559
hsa-miR-4741 gtagACAGCCCcaca CGGGCUGU m7b Created HPRO6_45242_G53546.1_235949559
hsa-miR-494-5p gtaGACAACCccaca AGGUUGUC m7b Disrupted HPRO6_45242_G53546.1_235949559
hsa-miR-626 gtAGACAGCcccaca AGCUGUCU m7b (m6b->m7b) HPRO6_45242_G53546.1_235949559
hsa-miR-6742-5p gtagacaACCCCACa AGUGGGGU m7b Disrupted HPRO6_45242_G53546.1_235949559
hsa-miR-6855-5p gtagacAACCCCAca UUGGGGUU m7b Disrupted HPRO6_45242_G53546.1_235949559
hsa-miR-6876-3p gtAGACAGCcccaca AGCUGUCU m7b (m6b->m7b) HPRO6_45242_G53546.1_235949559
hsa-miR-762 gtagaCAGCCCCaca GGGGCUGG m7a Created HPRO6_45242_G53546.1_235949559
hsa-miR-1227-5p gtagacaGCCCCACa GUGGGGCC m7a Created HPTA1_6694_G9443.1_235949559
hsa-miR-185-3p gtagaCAGCCCCaca AGGGGCUG m7b Created HPTA1_6694_G9443.1_235949559
hsa-miR-193b-5p gtagacAACCCCaca CGGGGUUU m6b Disrupted HPTA1_6694_G9443.1_235949559
hsa-miR-3151-5p gtagacaGCCCCACa GGUGGGGC m7b Created HPTA1_6694_G9443.1_235949559
hsa-miR-3170 gtagacAACCCCAca CUGGGGUU m7b Disrupted HPTA1_6694_G9443.1_235949559
hsa-miR-323b-5p gtaGACAACCccaca AGGUUGUC m7b Disrupted HPTA1_6694_G9443.1_235949559
hsa-miR-410-5p gtaGACAACCccaca AGGUUGUC m7b Disrupted HPTA1_6694_G9443.1_235949559
hsa-miR-4492 gtagaCAGCCCCaca GGGGCUGG m7a Created HPTA1_6694_G9443.1_235949559
hsa-miR-4675 gtagACAGCCCCaca GGGGCUGU m8a Created HPTA1_6694_G9443.1_235949559
hsa-miR-4741 gtagACAGCCCcaca CGGGCUGU m7b Created HPTA1_6694_G9443.1_235949559
hsa-miR-494-5p gtaGACAACCccaca AGGUUGUC m7b Disrupted HPTA1_6694_G9443.1_235949559
hsa-miR-626 gtAGACAGCcccaca AGCUGUCU m7b (m6b->m7b) HPTA1_6694_G9443.1_235949559
hsa-miR-6742-5p gtagacaACCCCACa AGUGGGGU m7b Disrupted HPTA1_6694_G9443.1_235949559
hsa-miR-6855-5p gtagacAACCCCAca UUGGGGUU m7b Disrupted HPTA1_6694_G9443.1_235949559
hsa-miR-6876-3p gtAGACAGCcccaca AGCUGUCU m7b (m6b->m7b) HPTA1_6694_G9443.1_235949559
hsa-miR-762 gtagaCAGCCCCaca GGGGCUGG m7a Created HPTA1_6694_G9443.1_235949559
hsa-miR-1227-5p gtagacaGCCCCACa GUGGGGCC m7a Created HPTA3_10990_G17318.1_235949559
hsa-miR-185-3p gtagaCAGCCCCaca AGGGGCUG m7b Created HPTA3_10990_G17318.1_235949559
hsa-miR-193b-5p gtagacAACCCCaca CGGGGUUU m6b Disrupted HPTA3_10990_G17318.1_235949559
hsa-miR-3151-5p gtagacaGCCCCACa GGUGGGGC m7b Created HPTA3_10990_G17318.1_235949559
hsa-miR-3170 gtagacAACCCCAca CUGGGGUU m7b Disrupted HPTA3_10990_G17318.1_235949559
hsa-miR-323b-5p gtaGACAACCccaca AGGUUGUC m7b Disrupted HPTA3_10990_G17318.1_235949559
hsa-miR-410-5p gtaGACAACCccaca AGGUUGUC m7b Disrupted HPTA3_10990_G17318.1_235949559
hsa-miR-4492 gtagaCAGCCCCaca GGGGCUGG m7a Created HPTA3_10990_G17318.1_235949559
hsa-miR-4675 gtagACAGCCCCaca GGGGCUGU m8a Created HPTA3_10990_G17318.1_235949559
hsa-miR-4741 gtagACAGCCCcaca CGGGCUGU m7b Created HPTA3_10990_G17318.1_235949559
hsa-miR-494-5p gtaGACAACCccaca AGGUUGUC m7b Disrupted HPTA3_10990_G17318.1_235949559
hsa-miR-626 gtAGACAGCcccaca AGCUGUCU m7b (m6b->m7b) HPTA3_10990_G17318.1_235949559
hsa-miR-6742-5p gtagacaACCCCACa AGUGGGGU m7b Disrupted HPTA3_10990_G17318.1_235949559
hsa-miR-6855-5p gtagacAACCCCAca UUGGGGUU m7b Disrupted HPTA3_10990_G17318.1_235949559
hsa-miR-6876-3p gtAGACAGCcccaca AGCUGUCU m7b (m6b->m7b) HPTA3_10990_G17318.1_235949559
hsa-miR-762 gtagaCAGCCCCaca GGGGCUGG m7a Created HPTA3_10990_G17318.1_235949559

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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