SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_014521
Gene Symbol: SH3BP4
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.235055663G>T COSN8990311 AOCS-091-1-3 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-603 AGTGTGTGtgtgttt CACACACU m8a Disrupted HHFKP_86263_cluster-13451_28_29
hsa-miR-8485 agtgTGTGTGTGttt CACACACA m8a Disrupted HHFKP_86263_cluster-13451_28_29

Mutation Mutation ID Sample Name Cancer Type
chr2:g.235055246C>A COSN5500297 RK143_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3145-3p cccgAATATCattct AGAUAUUU m6b Created HHKTA_21253_NM_014521|4705|4744|3.41816734308881|0.217900959069393
hsa-miR-5186 cccgAATCTCattct AGAGAUUG m6b Disrupted HHKTA_21253_NM_014521|4705|4744|3.41816734308881|0.217900959069393
hsa-miR-6074 cccGAATATCattct GAUAUUCA m7a Created HHKTA_21253_NM_014521|4705|4744|3.41816734308881|0.217900959069393

Mutation Mutation ID Sample Name Cancer Type
chr2:g.235055002G>T COSN6681610 CHC433T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3662 aagatgaTCATTTTg GAAAAUGA m7b Created HHFCT_92900_cluster-13451_23_354
hsa-miR-6847-3p aagATGAGCattttg GGCUCAUG m6b Disrupted HHFCT_92900_cluster-13451_23_354
hsa-miR-6870-3p aaGATGAGCattttg GCUCAUCC m7a (m7a->m6a) HHFCT_92900_cluster-13451_23_354
hsa-miR-3662 aagatgaTCATTTTg GAAAAUGA m7b Created HHFKP_86256_cluster-13451_21_374
hsa-miR-6847-3p aagATGAGCattttg GGCUCAUG m6b Disrupted HHFKP_86256_cluster-13451_21_374
hsa-miR-6870-3p aaGATGAGCattttg GCUCAUCC m7a (m7a->m6a) HHFKP_86256_cluster-13451_21_374

Mutation Mutation ID Sample Name Cancer Type
chr2:g.235054690C>T COSN7240445 8036161 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-5p ttttTTCTTTGaggt CAAAGAAU m7a Created HHFCT_92896_cluster-13451_19_29
hsa-miR-3148 tTTTTTCCttgaggt UGGAAAAA m7b Disrupted HHFCT_92896_cluster-13451_19_29
hsa-miR-561-5p tttttTCCTTGAggt AUCAAGGA m7b Disrupted HHFCT_92896_cluster-13451_19_29
hsa-miR-651-3p tttTTTCCTTgaggt AAAGGAAA m7b Disrupted HHFCT_92896_cluster-13451_19_29
hsa-miR-6830-5p ttttTTCCTTGaggt CCAAGGAA m7b Disrupted HHFCT_92896_cluster-13451_19_29
hsa-miR-186-5p ttttTTCTTTGaggt CAAAGAAU m7a Created HHFKP_86254_cluster-13451_19_15
hsa-miR-3148 tTTTTTCCttgaggt UGGAAAAA m7b Disrupted HHFKP_86254_cluster-13451_19_15
hsa-miR-561-5p tttttTCCTTGAggt AUCAAGGA m7b Disrupted HHFKP_86254_cluster-13451_19_15
hsa-miR-651-3p tttTTTCCTTgaggt AAAGGAAA m7b Disrupted HHFKP_86254_cluster-13451_19_15
hsa-miR-6830-5p ttttTTCCTTGaggt CCAAGGAA m7b Disrupted HHFKP_86254_cluster-13451_19_15

Mutation Mutation ID Sample Name Cancer Type
chr2:g.235054051A>G COSN6175046 RK210_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3606-3p agtatAAATTTaaat AAAAUUUC m6b Disrupted HHKTA_50409_NM_014521|3507|3546|1.34130617260447|0.217900959069393
hsa-miR-513a-3p agtatAAATTTAaat UAAAUUUC m7a Disrupted HHKTA_50409_NM_014521|3507|3546|1.34130617260447|0.217900959069393
hsa-miR-513c-3p agtatAAATTTAaat UAAAUUUC m7a Disrupted HHKTA_50409_NM_014521|3507|3546|1.34130617260447|0.217900959069393
hsa-miR-3606-3p agtatAAATTTaaat AAAAUUUC m6b Disrupted HPKTA_35466_G38136.1_235962708
hsa-miR-513a-3p agtatAAATTTAaat UAAAUUUC m7a Disrupted HPKTA_35466_G38136.1_235962708
hsa-miR-513c-3p agtatAAATTTAaat UAAAUUUC m7a Disrupted HPKTA_35466_G38136.1_235962708
hsa-miR-3606-3p agtatAAATTTaaat AAAAUUUC m6b Disrupted HPTK1_17265_G20533.1_235962709
hsa-miR-513a-3p agtatAAATTTAaat UAAAUUUC m7a Disrupted HPTK1_17265_G20533.1_235962709
hsa-miR-513c-3p agtatAAATTTAaat UAAAUUUC m7a Disrupted HPTK1_17265_G20533.1_235962709

Mutation Mutation ID Sample Name Cancer Type
chr2:g.235053786C>T COSM3579484 TCGA-EE-A2A2-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1286 ccttcaGTCCTGCgg UGCAGGAC m7b Created HHFKP_86242_cluster-13451_7_32
hsa-miR-3169 ccttCAGTCCTgcgg UAGGACUG m7b Created HHFKP_86242_cluster-13451_7_32
hsa-miR-4446-3p ccttCAGCCCTGcgg CAGGGCUG m8a Disrupted HHFKP_86242_cluster-13451_7_32
hsa-miR-4656 cctTCAGCCCtgcgg UGGGCUGA m7b Disrupted HHFKP_86242_cluster-13451_7_32
hsa-miR-4740-5p cctTCAGTCCTgcgg AGGACUGA m8a Created HHFKP_86242_cluster-13451_7_32
hsa-miR-6132 ccttcaGCCCTGCgg AGCAGGGC m7b Disrupted HHFKP_86242_cluster-13451_7_32
hsa-miR-6836-5p ccttcaGCCCTGCGg CGCAGGGC m8a Disrupted HHFKP_86242_cluster-13451_7_32

Mutation Mutation ID Sample Name Cancer Type
chr2:g.235053778G>A COSM1752447 B86-Tumor [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4493 agcagccGCCTTCag AGAAGGCC m6b Disrupted HHFKP_86242_cluster-13451_7_32
hsa-miR-524-3p agcagcCGCCTTCag GAAGGCGC m7a Disrupted HHFKP_86242_cluster-13451_7_32
hsa-miR-525-3p agcagcCGCCTTCag GAAGGCGC m7a Disrupted HHFKP_86242_cluster-13451_7_32
hsa-miR-605-3p agcagccGCCTTCag AGAAGGCA m6b Disrupted HHFKP_86242_cluster-13451_7_32
hsa-miR-6126 agcagccGCCTTCAg GUGAAGGC m7b Disrupted HHFKP_86242_cluster-13451_7_32
hsa-miR-647 aGCAGCCACcttcag GUGGCUGC m8a (m7a->m8a) HHFKP_86242_cluster-13451_7_32
hsa-miR-6762-3p AGCAGCCAccttcag UGGCUGCU m8a Created HHFKP_86242_cluster-13451_7_32
hsa-miR-6815-5p agcaGCCACCTtcag UAGGUGGC m7b Created HHFKP_86242_cluster-13451_7_32
hsa-miR-6865-5p agcaGCCACCTtcag UAGGUGGC m7b Created HHFKP_86242_cluster-13451_7_32

Mutation Mutation ID Sample Name Cancer Type
chr2:g.235053768G>A COSM418812 TCGA-C4-A0F1-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4330 acgtTCTGAGagcag CCUCAGAU m6b Disrupted HHFKP_86242_cluster-13451_7_32
hsa-miR-5687 aCGTTCTAAgagcag UUAGAACG m8a (m7a->m8a) HHFKP_86242_cluster-13451_7_32
Mutation Mutation ID Sample Name Cancer Type
chr2:g.235053763G>A COSM1018227 TCGA-D1-A177-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.235053756C>A COSM3938993 ESCC-059T [oesophagus][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-199a-5p tgaactCACTGGacg CCCAGUGU m6b Created HHFKP_86242_cluster-13451_7_32
hsa-miR-199b-5p tgaactCACTGGacg CCCAGUGU m6b Created HHFKP_86242_cluster-13451_7_32
hsa-miR-3174 tgaACTCACTggacg UAGUGAGU m7b Created HHFKP_86242_cluster-13451_7_32
hsa-miR-4270 tgaaCTCCCTGgacg UCAGGGAG m7b Disrupted HHFKP_86242_cluster-13451_7_32
hsa-miR-4441 tgaaCTCCCTGgacg ACAGGGAG m7b Disrupted HHFKP_86242_cluster-13451_7_32
hsa-miR-4685-5p tgaactCCCTGGacg CCCAGGGC m6b Disrupted HHFKP_86242_cluster-13451_7_32
hsa-miR-5190 tgaacTCACTGGacg CCAGUGAC m7a Created HHFKP_86242_cluster-13451_7_32
hsa-miR-6754-5p tgaaCTCCCTGGacg CCAGGGAG m8a Disrupted HHFKP_86242_cluster-13451_7_32
hsa-miR-6837-5p tgaactCCCTGGacg ACCAGGGC m6b Disrupted HHFKP_86242_cluster-13451_7_32
hsa-miR-7113-5p tgaacTCCCTGGAcg UCCAGGGA m8a Disrupted HHFKP_86242_cluster-13451_7_32

Mutation Mutation ID Sample Name Cancer Type
chr2:g.235053755C>T COSM574312 TCGA-67-3771-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4270 gtgaaCTCCCTGgac UCAGGGAG m7b Disrupted HHFKP_86242_cluster-13451_7_32
hsa-miR-4441 gtgaaCTCCCTGgac ACAGGGAG m7b Disrupted HHFKP_86242_cluster-13451_7_32
hsa-miR-4685-5p gtgaactCCCTGGac CCCAGGGC m6b Disrupted HHFKP_86242_cluster-13451_7_32
hsa-miR-665 gtgaactTCCTGGac ACCAGGAG m6b Created HHFKP_86242_cluster-13451_7_32
hsa-miR-6754-5p gtgaaCTCCCTGGac CCAGGGAG m8a Disrupted HHFKP_86242_cluster-13451_7_32
hsa-miR-6837-5p gtgaactCCCTGGac ACCAGGGC m6b Disrupted HHFKP_86242_cluster-13451_7_32
hsa-miR-7113-5p gtgaacTCCCTGGAc UCCAGGGA m8a Disrupted HHFKP_86242_cluster-13451_7_32

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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