SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | hsa_circ_0018398 |
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Gene Symbol: | SGMS1 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr10:g.50572999T>G | COSN5875907 | RK211_C01 | [liver][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-136-5p | cagctATGGAGatga | ACUCCAUU | m6b | Created | HHFCT_17806_cluster-2964_62_8 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr10:g.50311392A>G | COSM4905914 | TCGA-EE-A17X-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1207-3p | aagcCCAGCTGcgaa | UCAGCUGG | m7b | Created | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-3147 | aaGCCCAACtgcgaa | GGUUGGGC | m7b | (m7b->m6b) | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-378g | aAGCCCAGctgcgaa | ACUGGGCU | m7b | Created | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-4259 | aagCCCAACTGcgaa | CAGUUGGG | m8a | Disrupted | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-1207-3p | aagcCCAGCTGcgaa | UCAGCUGG | m7b | Created | HHFKP_16890_cluster-2964_20_368 |
hsa-miR-3147 | aaGCCCAACtgcgaa | GGUUGGGC | m7b | (m7b->m6b) | HHFKP_16890_cluster-2964_20_368 |
hsa-miR-378g | aAGCCCAGctgcgaa | ACUGGGCU | m7b | Created | HHFKP_16890_cluster-2964_20_368 |
hsa-miR-4259 | aagCCCAACTGcgaa | CAGUUGGG | m8a | Disrupted | HHFKP_16890_cluster-2964_20_368 |
hsa-miR-1207-3p | aagcCCAGCTGcgaa | UCAGCUGG | m7b | Created | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-3147 | aaGCCCAACtgcgaa | GGUUGGGC | m7b | (m7b->m6b) | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-3147 | aaGCCCAACtgcgaa | GGUUGGGC | m7b | (m7b->m6b) | HHFKP_16890_cluster-2964_20_368 |
hsa-miR-378g | aAGCCCAGctgcgaa | ACUGGGCU | m7b | Created | HHFKP_16890_cluster-2964_20_368 |
hsa-miR-4259 | aagCCCAACTGcgaa | CAGUUGGG | m8a | Disrupted | HHFKP_16890_cluster-2964_20_368 |
hsa-miR-378g | aAGCCCAGctgcgaa | ACUGGGCU | m7b | Created | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-4259 | aagCCCAACTGcgaa | CAGUUGGG | m8a | Disrupted | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-1207-3p | aagcCCAGCTGcgaa | UCAGCUGG | m7b | Created | HHFKP_16890_cluster-2964_20_368 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr10:g.50311387G>A | COSM3438560 | TCGA-EE-A2MS-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-6516-5p | caACTGCAAAgaata | UUUGCAGU | m8a | Created | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-6875-3p | caactgcGAAGAATa | AUUCUUCC | m7a | Disrupted | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-6516-5p | caACTGCAAAgaata | UUUGCAGU | m8a | Created | HHFKP_16890_cluster-2964_20_368 |
hsa-miR-6875-3p | caactgcGAAGAATa | AUUCUUCC | m7a | Disrupted | HHFKP_16890_cluster-2964_20_368 |
hsa-miR-6516-5p | caACTGCAAAgaata | UUUGCAGU | m8a | Created | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-6875-3p | caactgcGAAGAATa | AUUCUUCC | m7a | Disrupted | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-6516-5p | caACTGCAAAgaata | UUUGCAGU | m8a | Created | HHFKP_16890_cluster-2964_20_368 |
hsa-miR-6875-3p | caactgcGAAGAATa | AUUCUUCC | m7a | Disrupted | HHFKP_16890_cluster-2964_20_368 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr10:g.50311371C>A | COSM284951 | TCGA-AA-A010-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3908 | tgaagctCATTGCTg | GAGCAAUG | m7b | Disrupted | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-556-5p | tgaAGCTCATtgctg | GAUGAGCU | m7b | Disrupted | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-3908 | tgaagctCATTGCTg | GAGCAAUG | m7b | Disrupted | HHFKP_16890_cluster-2964_20_368 |
hsa-miR-556-5p | tgaAGCTCATtgctg | GAUGAGCU | m7b | Disrupted | HHFKP_16890_cluster-2964_20_368 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr10:g.50311345C>T | COSM4874704 | TCGA-D1-A103-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4676-5p | tctatcACTGGCTCt | GAGCCAGU | m8a | Disrupted | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-575 | tctatcACTGGCTCt | GAGCCAGU | m8a | Disrupted | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-4676-5p | tctatcACTGGCTCt | GAGCCAGU | m8a | Disrupted | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-575 | tctatcACTGGCTCt | GAGCCAGU | m8a | Disrupted | HHFCT_17767_cluster-2964_19_20 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr10:g.50311323G>A | COSM3438559 | TCGA-EE-A2GC-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4286 | tgtGTGGGGactatc | ACCCCACU | m6b | Disrupted | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-4474-5p | tgtgtgGAGACTAtc | UUAGUCUC | m7b | Created | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-5588-3p | tgtgtgGGGACTatc | AAGUCCCA | m6b | Disrupted | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-4286 | tgtGTGGGGactatc | ACCCCACU | m6b | Disrupted | HHFKP_16889_cluster-2964_19_161 |
hsa-miR-4474-5p | tgtgtgGAGACTAtc | UUAGUCUC | m7b | Created | HHFKP_16889_cluster-2964_19_161 |
hsa-miR-5588-3p | tgtgtgGGGACTatc | AAGUCCCA | m6b | Disrupted | HHFKP_16889_cluster-2964_19_161 |
hsa-miR-4286 | tgtGTGGGGactatc | ACCCCACU | m6b | Disrupted | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-4474-5p | tgtgtgGAGACTAtc | UUAGUCUC | m7b | Created | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-5588-3p | tgtgtgGGGACTatc | AAGUCCCA | m6b | Disrupted | HHFCT_17767_cluster-2964_19_20 |
hsa-miR-4286 | tgtGTGGGGactatc | ACCCCACU | m6b | Disrupted | HHFKP_16889_cluster-2964_19_161 |
hsa-miR-4474-5p | tgtgtgGAGACTAtc | UUAGUCUC | m7b | Created | HHFKP_16889_cluster-2964_19_161 |
hsa-miR-5588-3p | tgtgtgGGGACTatc | AAGUCCCA | m6b | Disrupted | HHFKP_16889_cluster-2964_19_161 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr10:g.50311282C>T | COSM4014546 | TCGA-BR-6452-01 | [stomach][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3935 | acactTATCTACtta | UGUAGAUA | m7b | Created | HHFCT_17765_cluster-2964_17_10 |
hsa-miR-3935 | acactTATCTACtta | UGUAGAUA | m7b | Created | HHKTA_13235_NM_147156|1807|1846|5.36522469041788|0.198400288534171 |
hsa-miR-3935 | acactTATCTACtta | UGUAGAUA | m7b | Created | HPKTA_9482_G10100.1_52071037 |
hsa-miR-3935 | acactTATCTACtta | UGUAGAUA | m7b | Created | HPKTB_1679_G2115.1_52071046 |
hsa-miR-3935 | acactTATCTACtta | UGUAGAUA | m7b | Created | HPSLB_1113_G1359.1_52071046 |
hsa-miR-3935 | acactTATCTACtta | UGUAGAUA | m7b | Created | HHFCT_17765_cluster-2964_17_10 |
hsa-miR-3935 | acactTATCTACtta | UGUAGAUA | m7b | Created | HHKTA_13235_NM_147156|1807|1846|5.36522469041788|0.198400288534171 |
hsa-miR-3935 | acactTATCTACtta | UGUAGAUA | m7b | Created | HPKTA_9482_G10100.1_52071037 |
hsa-miR-3935 | acactTATCTACtta | UGUAGAUA | m7b | Created | HPKTB_1679_G2115.1_52071046 |
hsa-miR-3935 | acactTATCTACtta | UGUAGAUA | m7b | Created | HPSLB_1113_G1359.1_52071046 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr10:g.50311270T>G | COSM1716049 | 11 | [ovary][NS][other][neoplasm] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3161 | ttatTTATCAaagag | CUGAUAAG | m6b | Disrupted | HHFCT_17765_cluster-2964_17_10 |
hsa-miR-4639-5p | ttatTTAGCAAagag | UUGCUAAG | m7a | Created | HHFCT_17765_cluster-2964_17_10 |
hsa-miR-6885-3p | ttatttAGCAAAGag | CUUUGCUU | m7a | Created | HHFCT_17765_cluster-2964_17_10 |
hsa-miR-3161 | ttatTTATCAaagag | CUGAUAAG | m6b | Disrupted | HHKTA_13235_NM_147156|1807|1846|5.36522469041788|0.198400288534171 |
hsa-miR-4639-5p | ttatTTAGCAAagag | UUGCUAAG | m7a | Created | HHKTA_13235_NM_147156|1807|1846|5.36522469041788|0.198400288534171 |
hsa-miR-6885-3p | ttatttAGCAAAGag | CUUUGCUU | m7a | Created | HHKTA_13235_NM_147156|1807|1846|5.36522469041788|0.198400288534171 |
hsa-miR-3161 | ttatTTATCAaagag | CUGAUAAG | m6b | Disrupted | HPKTA_9482_G10100.1_52071037 |
hsa-miR-4639-5p | ttatTTAGCAAagag | UUGCUAAG | m7a | Created | HPKTA_9482_G10100.1_52071037 |
hsa-miR-6885-3p | ttatttAGCAAAGag | CUUUGCUU | m7a | Created | HPKTA_9482_G10100.1_52071037 |
hsa-miR-3161 | ttatTTATCAaagag | CUGAUAAG | m6b | Disrupted | HPKTB_1679_G2115.1_52071046 |
hsa-miR-4639-5p | ttatTTAGCAAagag | UUGCUAAG | m7a | Created | HPKTB_1679_G2115.1_52071046 |
hsa-miR-6885-3p | ttatttAGCAAAGag | CUUUGCUU | m7a | Created | HPKTB_1679_G2115.1_52071046 |
hsa-miR-3161 | ttatTTATCAaagag | CUGAUAAG | m6b | Disrupted | HPSLB_1113_G1359.1_52071046 |
hsa-miR-4639-5p | ttatTTAGCAAagag | UUGCUAAG | m7a | Created | HPSLB_1113_G1359.1_52071046 |
hsa-miR-6885-3p | ttatttAGCAAAGag | CUUUGCUU | m7a | Created | HPSLB_1113_G1359.1_52071046 |