SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0018396
Gene Symbol: SGMS1
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.50308084C>T COSM3867394 TCGA-EE-A29M-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4699-5p gAATCTTCTgtattc AGAAGAUU m8a (m8a->m7a) HPCB3_3129_G4274.1_52067843
hsa-miR-4699-5p gAATCTTCTgtattc AGAAGAUU m8a (m8a->m7a) HPCB3_3129_G4274.1_52067843

Mutation Mutation ID Sample Name Cancer Type
chr10:g.50308077C>A COSM4875819 TCGA-BS-A0UF-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3123 ctgtATTCTCTtagc CAGAGAAU m7b Disrupted HHFKP_16888_cluster-2964_18_52
hsa-miR-369-3p ctGTATTATcttagc AAUAAUAC m7b (m6b->m7b) HHFKP_16888_cluster-2964_18_52
hsa-miR-374c-5p cTGTATTATcttagc AUAAUACA m8a (m7a->m8a) HHFKP_16888_cluster-2964_18_52
hsa-miR-3925-5p ctgtaTTCTCTTagc AAGAGAAC m7a Disrupted HHFKP_16888_cluster-2964_18_52
hsa-miR-4662a-3p ctgtatTATCTTagc AAAGAUAG m6b Created HHFKP_16888_cluster-2964_18_52
hsa-miR-655-3p cTGTATTATcttagc AUAAUACA m8a (m7a->m8a) HHFKP_16888_cluster-2964_18_52
hsa-miR-3123 ctgtATTCTCTtagc CAGAGAAU m7b Disrupted HPCB3_3129_G4274.1_52067843
hsa-miR-369-3p ctGTATTATcttagc AAUAAUAC m7b (m6b->m7b) HPCB3_3129_G4274.1_52067843
hsa-miR-374c-5p cTGTATTATcttagc AUAAUACA m8a (m7a->m8a) HPCB3_3129_G4274.1_52067843
hsa-miR-3925-5p ctgtaTTCTCTTagc AAGAGAAC m7a Disrupted HPCB3_3129_G4274.1_52067843
hsa-miR-4662a-3p ctgtatTATCTTagc AAAGAUAG m6b Created HPCB3_3129_G4274.1_52067843
hsa-miR-655-3p cTGTATTATcttagc AUAAUACA m8a (m7a->m8a) HPCB3_3129_G4274.1_52067843
hsa-miR-3123 ctgtATTCTCTtagc CAGAGAAU m7b Disrupted HHFKP_16888_cluster-2964_18_52
hsa-miR-369-3p ctGTATTATcttagc AAUAAUAC m7b (m6b->m7b) HHFKP_16888_cluster-2964_18_52
hsa-miR-374c-5p cTGTATTATcttagc AUAAUACA m8a (m7a->m8a) HHFKP_16888_cluster-2964_18_52
hsa-miR-3925-5p ctgtaTTCTCTTagc AAGAGAAC m7a Disrupted HHFKP_16888_cluster-2964_18_52
hsa-miR-4662a-3p ctgtatTATCTTagc AAAGAUAG m6b Created HHFKP_16888_cluster-2964_18_52
hsa-miR-655-3p cTGTATTATcttagc AUAAUACA m8a (m7a->m8a) HHFKP_16888_cluster-2964_18_52
hsa-miR-3123 ctgtATTCTCTtagc CAGAGAAU m7b Disrupted HPCB3_3129_G4274.1_52067843
hsa-miR-369-3p ctGTATTATcttagc AAUAAUAC m7b (m6b->m7b) HPCB3_3129_G4274.1_52067843
hsa-miR-374c-5p cTGTATTATcttagc AUAAUACA m8a (m7a->m8a) HPCB3_3129_G4274.1_52067843
hsa-miR-3925-5p ctgtaTTCTCTTagc AAGAGAAC m7a Disrupted HPCB3_3129_G4274.1_52067843
hsa-miR-4662a-3p ctgtatTATCTTagc AAAGAUAG m6b Created HPCB3_3129_G4274.1_52067843
hsa-miR-655-3p cTGTATTATcttagc AUAAUACA m8a (m7a->m8a) HPCB3_3129_G4274.1_52067843
Mutation Mutation ID Sample Name Cancer Type
chr10:g.50308070C>T COSM4014544 TCGA-HU-A4H3-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr10:g.50308069G>A COSM1492322 TCGA-AK-3427-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3607-5p tcttagCACATGacc GCAUGUGA m6b Created HHFCT_17764_cluster-2964_16_12
hsa-miR-4639-5p tCTTAGCAcatgacc UUGCUAAG m7b Created HHFCT_17764_cluster-2964_16_12
hsa-miR-3607-5p tcttagCACATGacc GCAUGUGA m6b Created HHFKP_16888_cluster-2964_18_52
hsa-miR-4639-5p tCTTAGCAcatgacc UUGCUAAG m7b Created HHFKP_16888_cluster-2964_18_52

Mutation Mutation ID Sample Name Cancer Type
chr10:g.50308058A>G COSM4949699 CHC304T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-143-5p gaccACTGCACtgtg GGUGCAGU m7b Created HHFCT_17764_cluster-2964_16_12
hsa-miR-148a-3p gaccacTGCACTGtg UCAGUGCA m7b Created HHFCT_17764_cluster-2964_16_12
hsa-miR-148b-3p gaccacTGCACTGtg UCAGUGCA m7b Created HHFCT_17764_cluster-2964_16_12
hsa-miR-152-3p gaccacTGCACTGtg UCAGUGCA m7b Created HHFCT_17764_cluster-2964_16_12
hsa-miR-4280 gaccaCTACACTgtg GAGUGUAG m7b Disrupted HHFCT_17764_cluster-2964_16_12
hsa-miR-4460 gACCACTAcactgtg AUAGUGGU m7b Disrupted HHFCT_17764_cluster-2964_16_12
hsa-miR-5693 gaCCACTGCactgtg GCAGUGGC m7a (m6a->m7a) HHFCT_17764_cluster-2964_16_12
hsa-miR-6073 gacCACTACactgtg GGUAGUGA m6b Disrupted HHFCT_17764_cluster-2964_16_12
hsa-miR-6718-5p GACCACTAcactgtg UAGUGGUC m8a Disrupted HHFCT_17764_cluster-2964_16_12
hsa-miR-143-5p gaccACTGCACtgtg GGUGCAGU m7b Created HHFKP_16888_cluster-2964_18_52
hsa-miR-148a-3p gaccacTGCACTGtg UCAGUGCA m7b Created HHFKP_16888_cluster-2964_18_52
hsa-miR-148b-3p gaccacTGCACTGtg UCAGUGCA m7b Created HHFKP_16888_cluster-2964_18_52
hsa-miR-152-3p gaccacTGCACTGtg UCAGUGCA m7b Created HHFKP_16888_cluster-2964_18_52
hsa-miR-4280 gaccaCTACACTgtg GAGUGUAG m7b Disrupted HHFKP_16888_cluster-2964_18_52
hsa-miR-4460 gACCACTAcactgtg AUAGUGGU m7b Disrupted HHFKP_16888_cluster-2964_18_52
hsa-miR-5693 gaCCACTGCactgtg GCAGUGGC m7a (m6a->m7a) HHFKP_16888_cluster-2964_18_52
hsa-miR-6073 gacCACTACactgtg GGUAGUGA m6b Disrupted HHFKP_16888_cluster-2964_18_52
hsa-miR-6718-5p GACCACTAcactgtg UAGUGGUC m8a Disrupted HHFKP_16888_cluster-2964_18_52
hsa-miR-143-5p gaccACTGCACtgtg GGUGCAGU m7b Created HHFCT_17764_cluster-2964_16_12
hsa-miR-148a-3p gaccacTGCACTGtg UCAGUGCA m7b Created HHFCT_17764_cluster-2964_16_12
hsa-miR-148b-3p gaccacTGCACTGtg UCAGUGCA m7b Created HHFCT_17764_cluster-2964_16_12
hsa-miR-152-3p gaccacTGCACTGtg UCAGUGCA m7b Created HHFCT_17764_cluster-2964_16_12
hsa-miR-4280 gaccaCTACACTgtg GAGUGUAG m7b Disrupted HHFCT_17764_cluster-2964_16_12
hsa-miR-4460 gACCACTAcactgtg AUAGUGGU m7b Disrupted HHFCT_17764_cluster-2964_16_12
hsa-miR-5693 gaCCACTGCactgtg GCAGUGGC m7a (m6a->m7a) HHFCT_17764_cluster-2964_16_12
hsa-miR-6073 gacCACTACactgtg GGUAGUGA m6b Disrupted HHFCT_17764_cluster-2964_16_12
hsa-miR-6718-5p GACCACTAcactgtg UAGUGGUC m8a Disrupted HHFCT_17764_cluster-2964_16_12
hsa-miR-143-5p gaccACTGCACtgtg GGUGCAGU m7b Created HHFKP_16888_cluster-2964_18_52
hsa-miR-148a-3p gaccacTGCACTGtg UCAGUGCA m7b Created HHFKP_16888_cluster-2964_18_52
hsa-miR-148b-3p gaccacTGCACTGtg UCAGUGCA m7b Created HHFKP_16888_cluster-2964_18_52
hsa-miR-152-3p gaccacTGCACTGtg UCAGUGCA m7b Created HHFKP_16888_cluster-2964_18_52
hsa-miR-4280 gaccaCTACACTgtg GAGUGUAG m7b Disrupted HHFKP_16888_cluster-2964_18_52
hsa-miR-4460 gACCACTAcactgtg AUAGUGGU m7b Disrupted HHFKP_16888_cluster-2964_18_52
hsa-miR-5693 gaCCACTGCactgtg GCAGUGGC m7a (m6a->m7a) HHFKP_16888_cluster-2964_18_52
hsa-miR-6073 gacCACTACactgtg GGUAGUGA m6b Disrupted HHFKP_16888_cluster-2964_18_52
hsa-miR-6718-5p GACCACTAcactgtg UAGUGGUC m8a Disrupted HHFKP_16888_cluster-2964_18_52

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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