SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0035125
Gene Symbol: SEMA6D
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.47764762G>A COSM1301174 TCGA-G2-A3IE-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-182-5p caTTGCCAAtgagcc UUUGGCAA m7b (m6b->m7b) HHFKP_50150_cluster-7288_6_121
hsa-miR-182-5p caTTGCCAAtgagcc UUUGGCAA m7b (m6b->m7b) HHFKP_50150_cluster-7288_6_121

Mutation Mutation ID Sample Name Cancer Type
chr15:g.47764747G>T COSM352560 LUAD_E00522 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1910-3p cTCTGCCTttccacc GAGGCAGA m7b Created HHFKP_50150_cluster-7288_6_121
hsa-miR-3714 ctCTGCCTTtccacc GAAGGCAG m7b (m6b->m7b) HHFKP_50150_cluster-7288_6_121
hsa-miR-3978 ctctgcCTTTCCACc GUGGAAAG m8a Created HHFKP_50150_cluster-7288_6_121
hsa-miR-548an ctcTGCCTTTccacc AAAAGGCA m7b Created HHFKP_50150_cluster-7288_6_121
hsa-miR-6511a-5p cTCTGCCTttccacc CAGGCAGA m7b Created HHFKP_50150_cluster-7288_6_121

Mutation Mutation ID Sample Name Cancer Type
chr15:g.47764747G>A COSM1265241 ESO-250 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5197-5p ctcTGCCATTccacc CAAUGGCA m7b Created HHFKP_50150_cluster-7288_6_121
hsa-miR-613 ctctgcCATTCCacc AGGAAUGU m6b Created HHFKP_50150_cluster-7288_6_121
hsa-miR-5197-5p ctcTGCCATTccacc CAAUGGCA m7b Created HHFKP_50150_cluster-7288_6_121
hsa-miR-613 ctctgcCATTCCacc AGGAAUGU m6b Created HHFKP_50150_cluster-7288_6_121

Mutation Mutation ID Sample Name Cancer Type
chr15:g.47762243C>T COSM962277 TCGA-AX-A0J1-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-653-3p tggCCAGTGAtgccg UUCACUGG m7b Created HHFKP_50149_cluster-7288_5_43
hsa-miR-7112-3p tggccaGTGATGCcg UGCAUCAC m7b Created HHFKP_50149_cluster-7288_5_43
hsa-miR-892b tgGCCAGTGatgccg CACUGGCU m7a (m6a->m7a) HHFKP_50149_cluster-7288_5_43
hsa-miR-193a-3p tGGCCAGTgatgccg AACUGGCC m7b Created HHFKP_50149_cluster-7288_5_43
hsa-miR-193b-3p tGGCCAGTgatgccg AACUGGCC m7b Created HHFKP_50149_cluster-7288_5_43
hsa-miR-653-3p tggCCAGTGAtgccg UUCACUGG m7b Created HHFKP_50149_cluster-7288_5_43
hsa-miR-7112-3p tggccaGTGATGCcg UGCAUCAC m7b Created HHFKP_50149_cluster-7288_5_43
hsa-miR-892b tgGCCAGTGatgccg CACUGGCU m7a (m6a->m7a) HHFKP_50149_cluster-7288_5_43

Mutation Mutation ID Sample Name Cancer Type
chr15:g.47762233T>G COSM470726 TCGA-BP-5200-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4274 gctGACTGCTtggcc CAGCAGUC m7b Created HHFKP_50149_cluster-7288_5_43
hsa-miR-4274 gctGACTGCTtggcc CAGCAGUC m7b Created HHFKP_50149_cluster-7288_5_43

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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