SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001198999
Gene Symbol: SEMA6D
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.47730780G>A COSN7046758 8069216 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-520g-3p ctcaccCACTTTGTg ACAAAGUG m8a Created HHRBL_4970_BCBL1-2of3-SCL_11845
hsa-miR-520h ctcaccCACTTTGTg ACAAAGUG m8a Created HHRBL_4970_BCBL1-2of3-SCL_11845
hsa-miR-6736-5p cTCACCCActttgtg CUGGGUGA m7b Created HHRBL_4970_BCBL1-2of3-SCL_11845
hsa-miR-6748-5p ctCACCCACtttgtg UGUGGGUG m7b (m6b->m7b) HHRBL_4970_BCBL1-2of3-SCL_11845
hsa-miR-3656 ctCACCCGCtttgtg GGCGGGUG m7b (m7b->m6b) HHRBL_4970_BCBL1-2of3-SCL_11845
hsa-miR-4701-3p cTCACCCActttgtg AUGGGUGA m7b Created HHRBL_4970_BCBL1-2of3-SCL_11845
hsa-miR-4796-3p ctcacCCACTTTgtg UAAAGUGG m7b Created HHRBL_4970_BCBL1-2of3-SCL_11845

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser