SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_152754 |
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Gene Symbol: | SEMA3D |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr7:g.85029028T>C | COSN8572498 | tumor_4135099 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4475 | ttTCCCTTGatatta | CAAGGGAC | m7a | (m7a->m6a) | HPCB1_36707_G46991.1_84658321 |
hsa-miR-561-5p | tttcCCTTGATatta | AUCAAGGA | m7a | Disrupted | HPCB1_36707_G46991.1_84658321 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr7:g.85015185T>C | COSM4798975 | BCM325T | [liver][NS][carcinoma][hepatocellular_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr7:g.85015175C>G | COSM3833392 | TCGA-GI-A2C9-01 | [breast][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3160-3p | tTCAGCTCTccttgc | AGAGCUGA | m8a | (m8a->m7a) | HHFKP_131393_cluster-21491_4_8 |
hsa-miR-4428 | ttcagcTCTCCTTGc | CAAGGAGA | m8a | Disrupted | HHFKP_131393_cluster-21491_4_8 |
hsa-miR-8080 | ttcagcTGTCCTTgc | GAAGGACA | m7b | Created | HHFKP_131393_cluster-21491_4_8 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr7:g.85015172C>T | COSM1724277 | 4_PRE-TREATMENT | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-19a-3p | agctctcTTTGCACa | UGUGCAAA | m7b | Created | HHFKP_131393_cluster-21491_4_8 |
hsa-miR-19b-3p | agctctcTTTGCACa | UGUGCAAA | m7b | Created | HHFKP_131393_cluster-21491_4_8 |
hsa-miR-4311 | agcTCTCTTTgcaca | GAAAGAGA | m7b | Created | HHFKP_131393_cluster-21491_4_8 |
hsa-miR-4428 | agcTCTCCTTGcaca | CAAGGAGA | m8a | Disrupted | HHFKP_131393_cluster-21491_4_8 |
hsa-miR-4708-3p | agctctCCTTGCaca | AGCAAGGC | m6b | Disrupted | HHFKP_131393_cluster-21491_4_8 |
hsa-miR-518a-5p | agctctCTTTGCAca | CUGCAAAG | m7b | Created | HHFKP_131393_cluster-21491_4_8 |
hsa-miR-527 | agctctCTTTGCAca | CUGCAAAG | m7b | Created | HHFKP_131393_cluster-21491_4_8 |
hsa-miR-548aw | agctctcTTTGCACa | GUGCAAAA | m7a | Created | HHFKP_131393_cluster-21491_4_8 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr7:g.85015168C>A | COSM1550479 | TCGA-44-7670-01 | [lung][right_upper_lobe][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-26b-3p | ctccttGAACAGatg | CCUGUUCU | m6b | Created | HHFKP_131393_cluster-21491_4_8 |
hsa-miR-4708-3p | ctCCTTGCacagatg | AGCAAGGC | m6b | Disrupted | HHFKP_131393_cluster-21491_4_8 |
hsa-miR-5008-3p | ctccttGCACAGatg | CCUGUGCU | m6b | Disrupted | HHFKP_131393_cluster-21491_4_8 |
hsa-miR-561-5p | cTCCTTGAacagatg | AUCAAGGA | m7b | Created | HHFKP_131393_cluster-21491_4_8 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr7:g.85015166C>T | COSM602602 | TCGA-05-4434-01 | [lung][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-5008-3p | ccttGCACAGatgcg | CCUGUGCU | m6b | Disrupted | HHFKP_131393_cluster-21491_4_8 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr7:g.85015162T>C | COSM76372 | TCGA-25-1315-01 | [ovary][NS][carcinoma][serous_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr7:g.85012095G>C | COSN8042949 | 8015858 | [pancreas][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-130b-5p | gggaAAAGAGaggag | ACUCUUUC | m6b | Disrupted | HHRBC_12119_BC3-2of3-SCL_12637 |
hsa-miR-3183 | gggaaaAGAGAGGag | GCCUCUCU | m7b | Disrupted | HHRBC_12119_BC3-2of3-SCL_12637 |
hsa-miR-4723-3p | gggaaaAGAGAGGag | CCCUCUCU | m7b | Disrupted | HHRBC_12119_BC3-2of3-SCL_12637 |
hsa-miR-4753-3p | gggaAAAGAGAggag | UUCUCUUU | m7b | Disrupted | HHRBC_12119_BC3-2of3-SCL_12637 |
hsa-miR-6769b-3p | gggaaaAGAGAGGag | CCCUCUCU | m7b | Disrupted | HHRBC_12119_BC3-2of3-SCL_12637 |
hsa-miR-6780a-3p | gggaaaaCAGAGGAg | CUCCUCUG | m7b | Created | HHRBC_12119_BC3-2of3-SCL_12637 |
hsa-miR-7111-3p | gggaaaaGAGAGGAg | AUCCUCUC | m7b | Disrupted | HHRBC_12119_BC3-2of3-SCL_12637 |