SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0080219
Gene Symbol: SEC61G
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.54752416G>A COSM485462 TCGA-CW-5581-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3157-5p cagtggTGGCTGAAt UUCAGCCA m8a Disrupted HHKTA_28758_NM_014302|294|333|2.59607646310543|4.27720887791014
hsa-miR-449b-3p cagtgGTGGCTGaat CAGCCACA m7a Disrupted HHKTA_28758_NM_014302|294|333|2.59607646310543|4.27720887791014
hsa-miR-4691-3p cagtgGTGGCTGaat CCAGCCAC m7b Disrupted HHKTA_28758_NM_014302|294|333|2.59607646310543|4.27720887791014
hsa-miR-5690 cagtgGTAGCTGAat UCAGCUAC m8a Created HHKTA_28758_NM_014302|294|333|2.59607646310543|4.27720887791014

Mutation Mutation ID Sample Name Cancer Type
chr7:g.54752300TC>C COSN1351232 HCC4T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3148 tttTTTTTCCtttcaa UGGAAAAA m7b Disrupted HPKMA_13773_G15938.1_54819997
hsa-miR-488-3p tttttttCCTTTCAA UUGAAAGG m8a Created HPKMA_13773_G15938.1_54819997
hsa-miR-651-3p tttttTTTCCTTTcaa AAAGGAAA m8a Disrupted HPKMA_13773_G15938.1_54819997
hsa-miR-3148 tttTTTTTCCtttcaa UGGAAAAA m7b Disrupted HHFKP_130946_uc003tqf.1_1_126
hsa-miR-488-3p tttttttCCTTTCAA UUGAAAGG m8a Created HHFKP_130946_uc003tqf.1_1_126
hsa-miR-651-3p tttttTTTCCTTTcaa AAAGGAAA m8a Disrupted HHFKP_130946_uc003tqf.1_1_126
hsa-miR-3148 tttTTTTTCCtttcaa UGGAAAAA m7b Disrupted HHRBC_11970_BC3-2of3-SCL_9796
hsa-miR-488-3p tttttttCCTTTCAA UUGAAAGG m8a Created HHRBC_11970_BC3-2of3-SCL_9796
hsa-miR-651-3p tttttTTTCCTTTcaa AAAGGAAA m8a Disrupted HHRBC_11970_BC3-2of3-SCL_9796

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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