SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
||||||||
Home | Search | Help | Download |
Transcript ID: | NM_033280 |
---|---|
Gene Symbol: | SEC11C |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr18:g.59155758G>T | COSM284848 | TCGA-AA-A010-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1248 | gtacaAAGAAGGcca | ACCUUCUU | m7b | Disrupted | HHFKP_68443_cluster-10860_2_17 |
hsa-miR-6844 | gtACAAAGAAggcca | UUCUUUGU | m8a | Disrupted | HHFKP_68443_cluster-10860_2_17 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr18:g.59152594G>A | COSM3526820 | TCGA-EE-A29D-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3124-3p | tttccGGAAAGaccc | ACUUUCCU | m6b | Created | HPRO6_36254_G42873.1_56819818 |
hsa-miR-4664-3p | tttCCGGAAagaccc | CUUCCGGU | m6b | Created | HPRO6_36254_G42873.1_56819818 |
hsa-miR-6830-3p | tttccgGAAAGACcc | UGUCUUUC | m7b | Created | HPRO6_36254_G42873.1_56819818 |
hsa-miR-3124-3p | tttccGGAAAGaccc | ACUUUCCU | m6b | Created | HPTA1_5416_G7620.1_56819818 |
hsa-miR-4664-3p | tttCCGGAAagaccc | CUUCCGGU | m6b | Created | HPTA1_5416_G7620.1_56819818 |
hsa-miR-6830-3p | tttccgGAAAGACcc | UGUCUUUC | m7b | Created | HPTA1_5416_G7620.1_56819818 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr18:g.59152591C>T | COSM989329 | TCGA-A5-A0VP-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr18:g.59152578C>T | COSM3891197 | TCGA-BF-A3DM-01 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1224-5p | tcctgtTCCTCACaa | GUGAGGAC | m7a | Disrupted | HPRO6_36254_G42873.1_56819818 |
hsa-miR-1294 | tcctgttCCTCACAa | UGUGAGGU | m7a | Disrupted | HPRO6_36254_G42873.1_56819818 |
hsa-miR-3915 | tcctgTTCCTCAcaa | UUGAGGAA | m7b | Disrupted | HPRO6_36254_G42873.1_56819818 |
hsa-miR-3928-3p | tcctGTTCCTCacaa | GGAGGAAC | m7b | Disrupted | HPRO6_36254_G42873.1_56819818 |
hsa-miR-4316 | tcctgttCCTCACaa | GGUGAGGC | m6b | Disrupted | HPRO6_36254_G42873.1_56819818 |
hsa-miR-539-5p | tcctgTTTCTCacaa | GGAGAAAU | m6b | Created | HPRO6_36254_G42873.1_56819818 |
hsa-miR-6858-5p | tcctgtTCCTCACaa | GUGAGGAG | m7a | Disrupted | HPRO6_36254_G42873.1_56819818 |
hsa-miR-1224-5p | tcctgtTCCTCACaa | GUGAGGAC | m7a | Disrupted | HPTA1_5416_G7620.1_56819818 |
hsa-miR-1294 | tcctgttCCTCACAa | UGUGAGGU | m7a | Disrupted | HPTA1_5416_G7620.1_56819818 |
hsa-miR-3915 | tcctgTTCCTCAcaa | UUGAGGAA | m7b | Disrupted | HPTA1_5416_G7620.1_56819818 |
hsa-miR-3928-3p | tcctGTTCCTCacaa | GGAGGAAC | m7b | Disrupted | HPTA1_5416_G7620.1_56819818 |
hsa-miR-4316 | tcctgttCCTCACaa | GGUGAGGC | m6b | Disrupted | HPTA1_5416_G7620.1_56819818 |
hsa-miR-539-5p | tcctgTTTCTCacaa | GGAGAAAU | m6b | Created | HPTA1_5416_G7620.1_56819818 |
hsa-miR-6858-5p | tcctgtTCCTCACaa | GUGAGGAG | m7a | Disrupted | HPTA1_5416_G7620.1_56819818 |
hsa-miR-1224-5p | tcctgtTCCTCACaa | GUGAGGAC | m7a | Disrupted | HPTA3_8876_G13942.1_56819824 |
hsa-miR-1294 | tcctgttCCTCACAa | UGUGAGGU | m7a | Disrupted | HPTA3_8876_G13942.1_56819824 |
hsa-miR-3915 | tcctgTTCCTCAcaa | UUGAGGAA | m7b | Disrupted | HPTA3_8876_G13942.1_56819824 |
hsa-miR-3928-3p | tcctGTTCCTCacaa | GGAGGAAC | m7b | Disrupted | HPTA3_8876_G13942.1_56819824 |
hsa-miR-4316 | tcctgttCCTCACaa | GGUGAGGC | m6b | Disrupted | HPTA3_8876_G13942.1_56819824 |
hsa-miR-539-5p | tcctgTTTCTCacaa | GGAGAAAU | m6b | Created | HPTA3_8876_G13942.1_56819824 |
hsa-miR-6858-5p | tcctgtTCCTCACaa | GUGAGGAG | m7a | Disrupted | HPTA3_8876_G13942.1_56819824 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr18:g.59149592G>A | COSM1389364 | TCGA-CK-6746-01 | [large_intestine][caecum][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3120-5p | ctcaCAGACAGtgag | CCUGUCUG | m7b | Created | HHFCT_73448_cluster-10860_2_12 |
hsa-miR-4677-3p | CTCACAGAcagtgag | UCUGUGAG | m8a | Created | HHFCT_73448_cluster-10860_2_12 |
hsa-miR-6514-3p | ctcACAGGCAGtgag | CUGCCUGU | m8a | Disrupted | HHFCT_73448_cluster-10860_2_12 |
hsa-miR-6760-3p | ctcacaGACAGTGag | ACACUGUC | m7b | Created | HHFCT_73448_cluster-10860_2_12 |
hsa-miR-6811-3p | ctCACAGGCagtgag | AGCCUGUG | m7b | (m7b->m6b) | HHFCT_73448_cluster-10860_2_12 |
hsa-miR-6890-3p | ctcacaGGCAGTGag | CCACUGCC | m7b | Disrupted | HHFCT_73448_cluster-10860_2_12 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr18:g.59149537G>A | COSM191897 | TCGA-AA-A00E-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr18:g.59149536C>T | COSM3970599 | TCGA-FG-A4MW-01 | [central_nervous_system][brain][glioma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-561-3p | tAAACTTTGccatga | CAAAGUUU | m8a | (m7a->m8a) | HHFCT_73447_cluster-10860_1_8 |
hsa-miR-561-3p | tAAACTTTGccatga | CAAAGUUU | m8a | (m7a->m8a) | HPRO6_36253_G42872.1_56816752 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr18:g.59149515C>T | COSM1303797 | TCGA-GV-A3QH-01 | [urinary_tract][bladder][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3160-3p | tcCAGCTCTattacc | AGAGCUGA | m7a | (m7a->m6a) | HPRO6_36253_G42872.1_56816752 |
hsa-miR-320a | tcCAGCTTTattacc | AAAAGCUG | m7b | (m6b->m7b) | HPRO6_36253_G42872.1_56816752 |
hsa-miR-320b | tcCAGCTTTattacc | AAAAGCUG | m7b | (m6b->m7b) | HPRO6_36253_G42872.1_56816752 |
hsa-miR-320c | tcCAGCTTTattacc | AAAAGCUG | m7b | (m6b->m7b) | HPRO6_36253_G42872.1_56816752 |
hsa-miR-320d | tcCAGCTTTattacc | AAAAGCUG | m7b | (m6b->m7b) | HPRO6_36253_G42872.1_56816752 |
hsa-miR-320e | tCCAGCTTTattacc | AAAGCUGG | m8a | (m7a->m8a) | HPRO6_36253_G42872.1_56816752 |
hsa-miR-4429 | tcCAGCTTTattacc | AAAAGCUG | m7b | (m6b->m7b) | HPRO6_36253_G42872.1_56816752 |
hsa-miR-4487 | tCCAGCTCTattacc | AGAGCUGG | m8a | (m8a->m7a) | HPRO6_36253_G42872.1_56816752 |
hsa-miR-5590-3p | tccagCTTTATTacc | AAUAAAGU | m7a | Created | HPRO6_36253_G42872.1_56816752 |
hsa-miR-9-3p | tccAGCTTTATtacc | AUAAAGCU | m8a | Created | HPRO6_36253_G42872.1_56816752 |