SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0029333
Gene Symbol: SCARB1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.124795229C>T COSM294796 TCGA-AA-3821-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-509-5p aCTGCAGTtgagcct UACUGCAG m7b Created HHFKP_34250_cluster-5839_19_15
hsa-miR-17-3p ACTGCAGTtgagcct ACUGCAGU m8a Created HHFKP_34250_cluster-5839_19_15
hsa-miR-24-3p actgcagCTGAGCCt UGGCUCAG m7b Disrupted HHFKP_34250_cluster-5839_19_15
hsa-miR-4418 aCTGCAGTtgagcct CACUGCAG m7b Created HHFKP_34250_cluster-5839_19_15
hsa-miR-509-3-5p aCTGCAGTtgagcct UACUGCAG m7b Created HHFKP_34250_cluster-5839_19_15
hsa-miR-6787-3p actgcAGCTGAGcct UCUCAGCU m7b Disrupted HHFKP_34250_cluster-5839_19_15
hsa-miR-509-5p aCTGCAGTtgagcct UACUGCAG m7b Created HHFCT_35634_cluster-5839_18_8
hsa-miR-17-3p ACTGCAGTtgagcct ACUGCAGU m8a Created HHFCT_35634_cluster-5839_18_8
hsa-miR-24-3p actgcagCTGAGCCt UGGCUCAG m7b Disrupted HHFCT_35634_cluster-5839_18_8
hsa-miR-4418 aCTGCAGTtgagcct CACUGCAG m7b Created HHFCT_35634_cluster-5839_18_8
hsa-miR-509-3-5p aCTGCAGTtgagcct UACUGCAG m7b Created HHFCT_35634_cluster-5839_18_8
hsa-miR-6787-3p actgcAGCTGAGcct UCUCAGCU m7b Disrupted HHFCT_35634_cluster-5839_18_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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