SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0017172
Gene Symbol: RYR2
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.237493042G>T COSM533461 TCGA-44-6774-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1236-3p ctaccaGGAAGAGac CCUCUUCC m7b Disrupted HPRO6_4833_G5673.1_237656345
hsa-miR-1343-3p ctaCCAGGAagagac CUCCUGGG m6b Disrupted HPRO6_4833_G5673.1_237656345

Mutation Mutation ID Sample Name Cancer Type
chr1:g.237493039C>A COSM906140 TCGA-BS-A0U7-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-502-5p ctcctaCAAGGAaga AUCCUUGC m6b Created HPRO6_4833_G5673.1_237656345
hsa-miR-8065 cTCCTACAaggaaga UGUAGGAA m7a Created HPRO6_4833_G5673.1_237656345
hsa-miR-1343-3p ctcctaCCAGGAaga CUCCUGGG m6b Disrupted HPRO6_4833_G5673.1_237656345
hsa-miR-135b-3p ctCCTACAaggaaga AUGUAGGG m6b Created HPRO6_4833_G5673.1_237656345

Mutation Mutation ID Sample Name Cancer Type
chr1:g.237493038C>A COSM906139 TCGA-BS-A0U7-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1266-3p tctcctAACAGGaag CCCUGUUC m6b Created HPRO6_4833_G5673.1_237656345
hsa-miR-1258 tcTCCTAACaggaag AGUUAGGA m7b (m6b->m7b) HPRO6_4833_G5673.1_237656345
hsa-miR-1343-3p tctcctaCCAGGAag CUCCUGGG m6b Disrupted HPRO6_4833_G5673.1_237656345
hsa-miR-7152-5p tctcctaACAGGAAg UUUCCUGU m7b Created HPRO6_4833_G5673.1_237656345

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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