SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0089415
Gene Symbol: RXRA
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.134421728C>T COSM3655421 TCGA-EE-A29D-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6753-5p cttttcaCCCTGGTg CACCAGGG m7b Disrupted HPCB1_41681_G53281.1_137313573

Mutation Mutation ID Sample Name Cancer Type
chr9:g.134417295G>T COSM364846 LUAD-E00897 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3691-3p gacctACTTGGaggc ACCAAGUC m6b Created HPRO6_77117_G92455.1_137309148
hsa-miR-5695 gacctaCTTGGAGgc ACUCCAAG m7b Created HPRO6_77117_G92455.1_137309148
hsa-miR-5697 gacCTACTTGgaggc UCAAGUAG m7b Created HPRO6_77117_G92455.1_137309148
Mutation Mutation ID Sample Name Cancer Type
chr9:g.134417294C>T COSM1240110 PCSI_0083_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr9:g.134417293A>T COSM2151536 TCGA-06-0649 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-493-3p gaGACCTTCgtggag UGAAGGUC m7b (m6b->m7b) HPRO6_77117_G92455.1_137309148
Mutation Mutation ID Sample Name Cancer Type
chr9:g.134417291C>A COSM1106572 TCGA-D1-A176-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr9:g.134417239C>T COSM247152 TCGA-A2-A1G4-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1226-3p gacatGCTGGTGgag UCACCAGC m7b Created HHFKP_150957_cluster-23071_125_46
hsa-miR-181d-3p gacatgCCGGTGGag CCACCGGG m7a Disrupted HHFKP_150957_cluster-23071_125_46
hsa-miR-338-3p gacATGCTGGtggag UCCAGCAU m7b Created HHFKP_150957_cluster-23071_125_46
hsa-miR-4304 gaCATGCCGGtggag CCGGCAUG m8a Disrupted HHFKP_150957_cluster-23071_125_46
hsa-miR-4733-3p gacatgCTGGTGGag CCACCAGG m7a Created HHFKP_150957_cluster-23071_125_46
hsa-miR-634 gacaTGCTGGTggag AACCAGCA m7b Created HHFKP_150957_cluster-23071_125_46

Mutation Mutation ID Sample Name Cancer Type
chr9:g.134417216C>T COSM3847995 TCGA-E2-A14N-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-133a-5p agtcgACCAGCagcg AGCUGGUA m6b Disrupted HHFKP_150957_cluster-23071_125_46
hsa-miR-138-5p agtcgACCAGCagcg AGCUGGUG m6b Disrupted HHFKP_150957_cluster-23071_125_46
hsa-miR-3663-5p agtcGACCAGCagcg GCUGGUCU m7a Disrupted HHFKP_150957_cluster-23071_125_46
hsa-miR-3692-5p agtcgaCCAGCAGcg CCUGCUGG m7b Disrupted HHFKP_150957_cluster-23071_125_46
hsa-miR-412-5p aGTCGACCAgcagcg UGGUCGAC m8a (m8a->m7a) HHFKP_150957_cluster-23071_125_46
hsa-miR-449c-3p agtcgACTAGCAgcg UUGCUAGU m7b Created HHFKP_150957_cluster-23071_125_46
hsa-miR-554 agtcGACTAGCagcg GCUAGUCC m7a Created HHFKP_150957_cluster-23071_125_46
hsa-miR-6131 agtcGACCAGCagcg GGCUGGUC m7b Disrupted HHFKP_150957_cluster-23071_125_46
hsa-miR-8086 agtcGACTAGCAgcg UGCUAGUC m8a Created HHFKP_150957_cluster-23071_125_46

Mutation Mutation ID Sample Name Cancer Type
chr9:g.134410399C>T COSN7558731 8012351 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3136-3p tcacatgTTGGGCCc UGGCCCAA m7b Created HHFKP_150951_cluster-23071_118_26
hsa-miR-338-3p tcacATGCTGGgccc UCCAGCAU m7b Disrupted HHFKP_150951_cluster-23071_118_26
hsa-miR-3607-5p TCACATGCtgggccc GCAUGUGA m8a Disrupted HHFKP_150951_cluster-23071_118_26
hsa-miR-7155-3p tcacatgTTGGGCCc UGGCCCAA m7b Created HHFKP_150951_cluster-23071_118_26

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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