SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0089414
Gene Symbol: RXRA
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr9:g.134380994A>T COSN14867715 CHC205T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1976 agcggGCAGGAGGtg CCUCCUGC m8a Disrupted HHFKP_150935_cluster-23071_99_16
hsa-miR-4722-3p agcgGGCAGGaggtg ACCUGCCA m6b Disrupted HHFKP_150935_cluster-23071_99_16
hsa-miR-6512-3p agcgGGCTGGAggtg UUCCAGCC m7b Created HHFKP_150935_cluster-23071_99_16
hsa-miR-660-3p agcgggCAGGAGGTg ACCUCCUG m8a Disrupted HHFKP_150935_cluster-23071_99_16
hsa-miR-6720-5p agcgGGCTGGAggtg UUCCAGCC m7b Created HHFKP_150935_cluster-23071_99_16
hsa-miR-6849-3p agcgGGCTGGaggtg ACCAGCCU m6b Created HHFKP_150935_cluster-23071_99_16
hsa-miR-766-3p agcggGCTGGAGgtg ACUCCAGC m7b Created HHFKP_150935_cluster-23071_99_16

Mutation Mutation ID Sample Name Cancer Type
chr9:g.134343835C>T COSN8581381 tumor_4120193 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4497 ttctTCCCGGAaggc CUCCGGGA m7b Disrupted HHFCT_163421_cluster-23071_45_18
hsa-miR-665 ttctTCCTGGaaggc ACCAGGAG m6b Created HHFCT_163421_cluster-23071_45_18
hsa-miR-4497 ttctTCCCGGAaggc CUCCGGGA m7b Disrupted HHFKP_150883_cluster-23071_38_26
hsa-miR-665 ttctTCCTGGaaggc ACCAGGAG m6b Created HHFKP_150883_cluster-23071_38_26

Mutation Mutation ID Sample Name Cancer Type
chr9:g.134343072C>A COSN1374949 HCC71T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-326 cttggaCCCAGAGca CCUCUGGG m7b Disrupted HHFKP_150882_cluster-23071_37_16
hsa-miR-330-5p cttggaCCCAGAGca UCUCUGGG m7b Disrupted HHFKP_150882_cluster-23071_37_16
hsa-miR-6861-5p cttggACCCAGagca ACUGGGUA m6b Disrupted HHFKP_150882_cluster-23071_37_16

Mutation Mutation ID Sample Name Cancer Type
chr9:g.134338985C>T COSN7558722 8035693 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1827 tgtCTGCCTCctgct UGAGGCAG m7b Disrupted HHFKP_150876_cluster-23071_29_25
hsa-miR-1910-3p tgTCTGCCTCctgct GAGGCAGA m8a Disrupted HHFKP_150876_cluster-23071_29_25
hsa-miR-3612 tgtcTGCCTCCTgct AGGAGGCA m8a Disrupted HHFKP_150876_cluster-23071_29_25
hsa-miR-4459 tgtctgCCTCCTGct CCAGGAGG m7b Disrupted HHFKP_150876_cluster-23071_29_25
hsa-miR-4695-5p tgtctGCCTCCTGct CAGGAGGC m8a Disrupted HHFKP_150876_cluster-23071_29_25
hsa-miR-4722-5p tgtctgcCTCCTGCt GGCAGGAG m7b Disrupted HHFKP_150876_cluster-23071_29_25
hsa-miR-650 tgtcTGCCTCCTgct AGGAGGCA m8a Disrupted HHFKP_150876_cluster-23071_29_25
hsa-miR-6511a-5p tgTCTGCCTcctgct CAGGCAGA m7b (m7b->m6b) HHFKP_150876_cluster-23071_29_25
hsa-miR-6828-5p tgtcTGCTTCCTgct AGGAAGCA m8a Created HHFKP_150876_cluster-23071_29_25

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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