SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0061168
Gene Symbol: RTEL1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr20:g.63675909C>T COSN15309213 LP6007404-DNA_A01 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3192-5p cacccaCTCCCAGgc UCUGGGAG m7b Created HHFCT_97328_cluster-14529_9_13
hsa-miR-4481 caCCCACTCCcaggc GGAGUGGG m8a Created HHFCT_97328_cluster-14529_9_13
hsa-miR-4651 cacCCACCCCcaggc CGGGGUGG m7b Disrupted HHFCT_97328_cluster-14529_9_13
hsa-miR-4745-5p caCCCACTCccaggc UGAGUGGG m7b (m6b->m7b) HHFCT_97328_cluster-14529_9_13
hsa-miR-504-3p caccCACTCCCaggc GGGAGUGC m7a Created HHFCT_97328_cluster-14529_9_13
hsa-miR-608 cacCCACCCCcaggc AGGGGUGG m7b Disrupted HHFCT_97328_cluster-14529_9_13
hsa-miR-637 cacccaCCCCCAGgc ACUGGGGG m7b Disrupted HHFCT_97328_cluster-14529_9_13
hsa-miR-6751-5p cacccACCCCCAggc UUGGGGGU m7b Disrupted HHFCT_97328_cluster-14529_9_13
hsa-miR-6752-5p caccCACCCCCaggc GGGGGGUG m7b Disrupted HHFCT_97328_cluster-14529_9_13
hsa-miR-6756-5p caCCCACCCccaggc AGGGUGGG m7b (m7b->m6b) HHFCT_97328_cluster-14529_9_13
hsa-miR-6766-5p caCCCACCCccaggc CGGGUGGG m7b (m7b->m6b) HHFCT_97328_cluster-14529_9_13
hsa-miR-6803-5p cacccACCCCCAGgc CUGGGGGU m8a Disrupted HHFCT_97328_cluster-14529_9_13
hsa-miR-6835-5p cacccACCCCCaggc AGGGGGUA m6b Disrupted HHFCT_97328_cluster-14529_9_13
hsa-miR-6842-5p caccCACCCCCAggc UGGGGGUG m8a Disrupted HHFCT_97328_cluster-14529_9_13
hsa-miR-6852-5p cacccacCCCCAGGc CCCUGGGG m7b Disrupted HHFCT_97328_cluster-14529_9_13
hsa-miR-7110-5p caccCACCCCCAggc UGGGGGUG m8a Disrupted HHFCT_97328_cluster-14529_9_13

Mutation Mutation ID Sample Name Cancer Type
chr20:g.63662311G>T COSN8611333 J30_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3914 tctgtcgGGTTCCTg AAGGAACC m7b Disrupted HHFKP_90578_cluster-14529_2_12

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser