SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001271834
Gene Symbol: RSRC1
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr3:g.158543389G>A COSM3365065 TCGA-BP-4340-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1267 agcaTCAACAGttgc CCUGUUGA m7b Created HPSLC_13203_G15634.1_158261166
hsa-miR-4502 agCATCAGCagttgc GCUGAUGA m7a (m7a->m6a) HPSLC_13203_G15634.1_158261166
hsa-miR-8075 agCATCAGCAgttgc UGCUGAUG m8a Disrupted HPSLC_13203_G15634.1_158261166
hsa-miR-93-3p agcaTCAGCAGTtgc ACUGCUGA m8a Disrupted HPSLC_13203_G15634.1_158261166
hsa-miR-1267 agcaTCAACAGttgc CCUGUUGA m7b Created HHFKP_104648_cluster-16237_25_6
hsa-miR-4502 agCATCAGCagttgc GCUGAUGA m7a (m7a->m6a) HHFKP_104648_cluster-16237_25_6
hsa-miR-8075 agCATCAGCAgttgc UGCUGAUG m8a Disrupted HHFKP_104648_cluster-16237_25_6
hsa-miR-93-3p agcaTCAGCAGTtgc ACUGCUGA m8a Disrupted HHFKP_104648_cluster-16237_25_6

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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