SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0014013
Gene Symbol: RPRD2
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr1:g.150457540G>T COSM423763 TCGA-AR-A1AR-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3200-5p actCTCAGATgtgga AAUCUGAG m7b Disrupted HHFKP_12319_cluster-679_8_142
hsa-miR-4712-3p aCTCTCATatgtgga AAUGAGAG m7b Created HHFKP_12319_cluster-679_8_142
hsa-miR-5580-3p actctCATATGTGga CACAUAUG m8a Created HHFKP_12319_cluster-679_8_142
hsa-miR-6761-5p aCTCTCAGAtgtgga UCUGAGAG m8a (m8a->m7a) HHFKP_12319_cluster-679_8_142
hsa-miR-3200-5p actCTCAGATgtgga AAUCUGAG m7b Disrupted HHFKP_12319_cluster-679_8_142
hsa-miR-4712-3p aCTCTCATatgtgga AAUGAGAG m7b Created HHFKP_12319_cluster-679_8_142
hsa-miR-5580-3p actctCATATGTGga CACAUAUG m8a Created HHFKP_12319_cluster-679_8_142
hsa-miR-6761-5p aCTCTCAGAtgtgga UCUGAGAG m8a (m8a->m7a) HHFKP_12319_cluster-679_8_142

Mutation Mutation ID Sample Name Cancer Type
chr1:g.150457540G>A COSM374934 LUAD-NYU575 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3200-5p actCTCAGATgtgga AAUCUGAG m7b Disrupted HHFKP_12319_cluster-679_8_142
hsa-miR-4251 acTCTCAGatgtgga CCUGAGAA m6b Disrupted HHFKP_12319_cluster-679_8_142
hsa-miR-4329 acTCTCAGatgtgga CCUGAGAC m6b Disrupted HHFKP_12319_cluster-679_8_142
hsa-miR-6761-5p aCTCTCAGAtgtgga UCUGAGAG m8a (m8a->m7a) HHFKP_12319_cluster-679_8_142
hsa-miR-3200-5p actCTCAGATgtgga AAUCUGAG m7b Disrupted HHFKP_12319_cluster-679_8_142
hsa-miR-4251 acTCTCAGatgtgga CCUGAGAA m6b Disrupted HHFKP_12319_cluster-679_8_142
hsa-miR-4329 acTCTCAGatgtgga CCUGAGAC m6b Disrupted HHFKP_12319_cluster-679_8_142
hsa-miR-6761-5p aCTCTCAGAtgtgga UCUGAGAG m8a (m8a->m7a) HHFKP_12319_cluster-679_8_142
Mutation Mutation ID Sample Name Cancer Type
chr1:g.150457513C>T COSM3473371 TCGA-EB-A1NK-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.150457357C>T COSM4513503 CSCC-29-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1299 aacccTTCCAGAtcc UUCUGGAA m7b Disrupted HPRO6_2938_G3401.1_150429836
hsa-miR-3202 aaCCCTTCCAgatcc UGGAAGGG m8a Disrupted HPRO6_2938_G3401.1_150429836
hsa-miR-4766-5p aaccCTTTCAGAtcc UCUGAAAG m8a Created HPRO6_2938_G3401.1_150429836
hsa-miR-488-3p aacCCTTTCAgatcc UUGAAAGG m7b Created HPRO6_2938_G3401.1_150429836
hsa-miR-5681a aaCCCTTTCagatcc AGAAAGGG m7b (m6b->m7b) HPRO6_2938_G3401.1_150429836
hsa-miR-6128 aacccTTCCAGatcc ACUGGAAU m6b Disrupted HPRO6_2938_G3401.1_150429836
hsa-miR-6730-5p aacCCTTTCagatcc AGAAAGGU m6b Created HPRO6_2938_G3401.1_150429836
hsa-miR-875-3p aacccTTCCAGatcc CCUGGAAA m6b Disrupted HPRO6_2938_G3401.1_150429836
hsa-miR-1299 aacccTTCCAGAtcc UUCUGGAA m7b Disrupted HPRO6_2938_G3401.1_150429836
hsa-miR-3202 aaCCCTTCCAgatcc UGGAAGGG m8a Disrupted HPRO6_2938_G3401.1_150429836
hsa-miR-4766-5p aaccCTTTCAGAtcc UCUGAAAG m8a Created HPRO6_2938_G3401.1_150429836
hsa-miR-488-3p aacCCTTTCAgatcc UUGAAAGG m7b Created HPRO6_2938_G3401.1_150429836
hsa-miR-5681a aaCCCTTTCagatcc AGAAAGGG m7b (m6b->m7b) HPRO6_2938_G3401.1_150429836
hsa-miR-6128 aacccTTCCAGatcc ACUGGAAU m6b Disrupted HPRO6_2938_G3401.1_150429836
hsa-miR-6730-5p aacCCTTTCagatcc AGAAAGGU m6b Created HPRO6_2938_G3401.1_150429836
hsa-miR-875-3p aacccTTCCAGatcc CCUGGAAA m6b Disrupted HPRO6_2938_G3401.1_150429836

Mutation Mutation ID Sample Name Cancer Type
chr1:g.150446403T>TA COSM4722661 T3116 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-323a-3p gcTAATGTaagtaat CACAUUAC m6b Disrupted HHFKP_12318_cluster-679_7_29
hsa-miR-600 gctaaTGTAAGTaat ACUUACAG m7a Disrupted HHFKP_12318_cluster-679_7_29
hsa-miR-323a-3p gcTAATGTaagtaat CACAUUAC m6b Disrupted HHFKP_12318_cluster-679_7_29
hsa-miR-600 gctaaTGTAAGTaat ACUUACAG m7a Disrupted HHFKP_12318_cluster-679_7_29

Mutation Mutation ID Sample Name Cancer Type
chr1:g.150446396G>T COSM1224230 587228 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-449b-3p agtgGTGGCTaatgt CAGCCACA m6b Disrupted HHFKP_12318_cluster-679_7_29
hsa-miR-449b-3p agtgGTGGCTaatgt CAGCCACA m6b Disrupted HHFKP_12318_cluster-679_7_29

Mutation Mutation ID Sample Name Cancer Type
chr1:g.150446381G>T COSM1224233 587222 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3682-5p atacaaAGAAGTAaa CUACUUCU m7b Disrupted HHFKP_12318_cluster-679_7_29
hsa-miR-6844 atACAAAGAAgtaaa UUCUUUGU m8a Disrupted HHFKP_12318_cluster-679_7_29
hsa-miR-3682-5p atacaaAGAAGTAaa CUACUUCU m7b Disrupted HPCB1_1203_G1529.1_150418844
hsa-miR-6844 atACAAAGAAgtaaa UUCUUUGU m8a Disrupted HPCB1_1203_G1529.1_150418844
hsa-miR-3682-5p atacaaAGAAGTAaa CUACUUCU m7b Disrupted HPKTA_2147_G2295.1_150418844
hsa-miR-6844 atACAAAGAAgtaaa UUCUUUGU m8a Disrupted HPKTA_2147_G2295.1_150418844
hsa-miR-3682-5p atacaaAGAAGTAaa CUACUUCU m7b Disrupted HHFKP_12318_cluster-679_7_29
hsa-miR-6844 atACAAAGAAgtaaa UUCUUUGU m8a Disrupted HHFKP_12318_cluster-679_7_29
hsa-miR-3682-5p atacaaAGAAGTAaa CUACUUCU m7b Disrupted HPCB1_1203_G1529.1_150418844
hsa-miR-6844 atACAAAGAAgtaaa UUCUUUGU m8a Disrupted HPCB1_1203_G1529.1_150418844
hsa-miR-3682-5p atacaaAGAAGTAaa CUACUUCU m7b Disrupted HPKTA_2147_G2295.1_150418844
hsa-miR-6844 atACAAAGAAgtaaa UUCUUUGU m8a Disrupted HPKTA_2147_G2295.1_150418844

Mutation Mutation ID Sample Name Cancer Type
chr1:g.150446273TC>T COSM267358 TCGA-AA-3672-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-432-5p ggcaagCTCCAAGctg UCUUGGAG m7b Disrupted HHFCT_12384_cluster-679_11_8
hsa-miR-4633-3p ggcaAGCTCCaagctg AGGAGCUA m6b Disrupted HHFCT_12384_cluster-679_11_8
hsa-miR-6500-5p ggcaAGCTCCaagctg AGGAGCUA m6b Disrupted HHFCT_12384_cluster-679_11_8
hsa-miR-6874-5p ggcaAGCTCCAagctg AUGGAGCU m7b Disrupted HHFCT_12384_cluster-679_11_8
hsa-miR-432-5p ggcaagCTCCAAGctg UCUUGGAG m7b Disrupted HHFKP_12316_cluster-679_5_16
hsa-miR-4633-3p ggcaAGCTCCaagctg AGGAGCUA m6b Disrupted HHFKP_12316_cluster-679_5_16
hsa-miR-6500-5p ggcaAGCTCCaagctg AGGAGCUA m6b Disrupted HHFKP_12316_cluster-679_5_16
hsa-miR-6874-5p ggcaAGCTCCAagctg AUGGAGCU m7b Disrupted HHFKP_12316_cluster-679_5_16
hsa-miR-432-5p ggcaagCTCCAAGctg UCUUGGAG m7b Disrupted HHFCT_12384_cluster-679_11_8
hsa-miR-4633-3p ggcaAGCTCCaagctg AGGAGCUA m6b Disrupted HHFCT_12384_cluster-679_11_8
hsa-miR-6500-5p ggcaAGCTCCaagctg AGGAGCUA m6b Disrupted HHFCT_12384_cluster-679_11_8
hsa-miR-6874-5p ggcaAGCTCCAagctg AUGGAGCU m7b Disrupted HHFCT_12384_cluster-679_11_8
hsa-miR-432-5p ggcaagCTCCAAGctg UCUUGGAG m7b Disrupted HHFKP_12316_cluster-679_5_16
hsa-miR-4633-3p ggcaAGCTCCaagctg AGGAGCUA m6b Disrupted HHFKP_12316_cluster-679_5_16
hsa-miR-6500-5p ggcaAGCTCCaagctg AGGAGCUA m6b Disrupted HHFKP_12316_cluster-679_5_16
hsa-miR-6874-5p ggcaAGCTCCAagctg AUGGAGCU m7b Disrupted HHFKP_12316_cluster-679_5_16

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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